Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1850

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,189,069	+		Pf6N2E2_1849	0.60	-1.2
2,189,069	+		Pf6N2E2_1849	0.60	-0.7
2,189,169	-		Pf6N2E2_1849	0.67	-0.7
2,189,206	-		Pf6N2E2_1849	0.70	+0.3
2,189,386	-		Pf6N2E2_1849	0.83	+0.3
2,189,429	+		Pf6N2E2_1849	0.86	+0.3
2,189,463	-		Pf6N2E2_1849	0.88	+0.3
2,189,636	-				+0.0
2,189,637	+				+0.3
2,189,638	-				+0.3
2,189,753	+				-0.7
2,189,785	+				+0.3
2,189,786	-				-0.6
2,189,786	-				+0.3
2,189,790	+				+0.3
2,189,791	-				-0.7
2,189,916	-				+0.3
2,189,916	-				+0.7
2,189,964	-				-1.3
2,190,056	-				-0.6
2,190,056	-				-0.7
2,190,161	+		Pf6N2E2_1850	0.15	+0.4
2,190,161	+		Pf6N2E2_1850	0.15	-0.7
2,190,206	+		Pf6N2E2_1850	0.17	-1.3
2,190,206	+		Pf6N2E2_1850	0.17	-0.1
2,190,206	+		Pf6N2E2_1850	0.17	-0.7
2,190,207	-		Pf6N2E2_1850	0.17	+0.3
2,190,207	-		Pf6N2E2_1850	0.17	-0.7
2,190,242	+		Pf6N2E2_1850	0.18	-0.7
2,190,243	-		Pf6N2E2_1850	0.18	-1.3
2,190,337	-		Pf6N2E2_1850	0.23	-0.7
2,190,406	+		Pf6N2E2_1850	0.26	-0.7
2,190,406	+		Pf6N2E2_1850	0.26	-0.7
2,190,406	+		Pf6N2E2_1850	0.26	+0.3
2,190,407	-		Pf6N2E2_1850	0.26	+0.3
2,190,407	-		Pf6N2E2_1850	0.26	+0.3
2,190,407	-		Pf6N2E2_1850	0.26	-0.7
2,190,407	-		Pf6N2E2_1850	0.26	-0.8
2,190,407	-		Pf6N2E2_1850	0.26	+0.3
2,190,407	-		Pf6N2E2_1850	0.26	+0.3
2,190,467	+		Pf6N2E2_1850	0.29	+0.3
2,190,825	-		Pf6N2E2_1850	0.45	-0.7
2,191,364	-		Pf6N2E2_1850	0.71	-1.1
2,191,635	+		Pf6N2E2_1850	0.83	+0.3
2,191,636	-		Pf6N2E2_1850	0.83	+0.3
2,191,870	+				-0.7
2,191,905	-				+0.3
2,191,995	+				-0.7
2,191,995	+				+0.3
2,191,995	+				-0.6
2,191,995	+				+0.3
2,191,995	+				-0.7
2,191,996	-				+0.3
2,192,451	+		Pf6N2E2_1851	0.32	-1.3
2,192,505	+		Pf6N2E2_1851	0.37	-1.3
2,192,547	-		Pf6N2E2_1851	0.40	-1.0
2,192,550	+		Pf6N2E2_1851	0.41	-0.7
2,192,550	+		Pf6N2E2_1851	0.41	+0.3
2,192,550	+		Pf6N2E2_1851	0.41	-0.4
2,192,551	-		Pf6N2E2_1851	0.41	+0.3
2,192,560	+		Pf6N2E2_1851	0.41	+0.3
2,192,561	-		Pf6N2E2_1851	0.42	+0.3
2,192,571	-		Pf6N2E2_1851	0.42	-1.3
2,192,581	-		Pf6N2E2_1851	0.43	-0.5