Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1833

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,170,253	+				+0.3
2,170,406	+		Pf6N2E2_1832	0.12	+0.3
2,170,407	-		Pf6N2E2_1832	0.12	-0.7
2,170,407	-		Pf6N2E2_1832	0.12	+0.3
2,170,407	-		Pf6N2E2_1832	0.12	-0.6
2,170,463	+		Pf6N2E2_1832	0.19	+0.3
2,170,500	-		Pf6N2E2_1832	0.23	+0.3
2,170,572	+		Pf6N2E2_1832	0.32	+0.3
2,170,649	-		Pf6N2E2_1832	0.41	+0.3
2,170,903	+		Pf6N2E2_1832	0.70	-0.1
2,170,903	+		Pf6N2E2_1832	0.70	+0.3
2,170,903	+		Pf6N2E2_1832	0.70	+0.3
2,170,903	+		Pf6N2E2_1832	0.70	+0.3
2,170,903	+		Pf6N2E2_1832	0.70	+0.3
2,170,903	+		Pf6N2E2_1832	0.70	+0.3
2,170,903	+		Pf6N2E2_1832	0.70	+0.3
2,170,904	-		Pf6N2E2_1832	0.70	+0.3
2,170,904	-		Pf6N2E2_1832	0.70	-0.1
2,170,996	-		Pf6N2E2_1832	0.81	-1.3
2,171,036	-		Pf6N2E2_1832	0.86	+0.3
2,171,036	-		Pf6N2E2_1832	0.86	-0.6
2,171,136	+				+0.3
2,171,136	+				+0.3
2,171,136	+				+0.3
2,171,137	-				+0.3
2,171,181	+				+0.3
2,171,655	+		Pf6N2E2_1833	0.33	+0.3
2,171,655	+		Pf6N2E2_1833	0.33	-1.7
2,171,657	+		Pf6N2E2_1833	0.33	-1.3
2,171,926	+		Pf6N2E2_1833	0.51	+0.3
2,171,926	+		Pf6N2E2_1833	0.51	+0.3
2,172,079	+		Pf6N2E2_1833	0.61	+0.3
2,172,081	+		Pf6N2E2_1833	0.61	+0.3
2,172,156	+		Pf6N2E2_1833	0.66	+0.3
2,172,156	+		Pf6N2E2_1833	0.66	+0.3
2,172,317	+		Pf6N2E2_1833	0.77	-0.6
2,172,317	+		Pf6N2E2_1833	0.77	+0.3
2,172,318	-		Pf6N2E2_1833	0.77	+0.3
2,172,318	-		Pf6N2E2_1833	0.77	+0.3
2,172,506	+		Pf6N2E2_1833	0.89	+0.3
2,172,574	+				+0.3
2,172,575	-				+0.3
2,172,575	-				+0.3
2,172,663	-				-1.1
2,172,668	+				-0.7
2,172,668	+				-0.7
2,172,669	-				+0.3
2,172,669	-				-1.5
2,172,672	+				-0.3
2,172,673	-				-0.7
2,173,007	+		Pf6N2E2_1834	0.44	-0.7
2,173,239	-		Pf6N2E2_1834	0.74	-0.5
2,173,399	+				+0.3
2,173,442	-				-0.7
2,173,442	-				+0.7
2,173,448	+				+0.3