Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1709

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,016,443	+		Pf6N2E2_1707	0.66	+0.3
2,016,444	-		Pf6N2E2_1707	0.66	+0.3
2,016,459	-		Pf6N2E2_1707	0.67	+0.3
2,016,536	+		Pf6N2E2_1707	0.73	+0.3
2,016,536	+		Pf6N2E2_1707	0.73	-0.7
2,016,536	+		Pf6N2E2_1707	0.73	-0.7
2,016,762	-		Pf6N2E2_1707	0.89	-0.7
2,016,762	-		Pf6N2E2_1707	0.89	+0.3
2,016,762	-		Pf6N2E2_1707	0.89	-1.7
2,016,762	-		Pf6N2E2_1707	0.89	+0.3
2,016,762	-		Pf6N2E2_1707	0.89	-0.3
2,016,762	-		Pf6N2E2_1707	0.89	-0.7
2,016,762	-		Pf6N2E2_1707	0.89	+0.3
2,016,766	-		Pf6N2E2_1707	0.89	+0.3
2,016,852	-				+0.3
2,017,127	+				+0.3
2,017,128	-				+0.3
2,017,128	-				-0.7
2,017,128	-				+0.3
2,017,128	-				+0.1
2,017,138	+				+0.3
2,017,139	-				+0.3
2,017,139	-				+0.3
2,017,139	-				+0.3
2,017,195	+				+0.3
2,017,300	+				-1.7
2,017,301	-				+0.3
2,017,317	+				-0.7
2,017,317	+				+0.3
2,017,317	+				-0.7
2,017,317	+				+0.7
2,017,317	+				+0.3
2,017,317	+				+0.3
2,017,317	+				+0.3
2,017,317	+				-0.7
2,017,318	-				-1.3
2,017,318	-				+0.3
2,017,318	-				-1.5
2,017,318	-				+0.3
2,017,904	+		Pf6N2E2_1709	0.48	-1.3
2,017,904	+		Pf6N2E2_1709	0.48	-1.3
2,017,976	-		Pf6N2E2_1709	0.54	-0.7
2,018,120	-		Pf6N2E2_1709	0.66	+0.3
2,018,120	-		Pf6N2E2_1709	0.66	+0.3
2,018,281	+		Pf6N2E2_1709	0.79	-2.4
2,018,281	+		Pf6N2E2_1709	0.79	+0.3
2,018,675	+				+0.3
2,018,676	-				-0.7
2,018,752	-		Pf6N2E2_1710	0.13	-0.7
2,019,029	+		Pf6N2E2_1710	0.35	+0.3
2,019,029	+		Pf6N2E2_1710	0.35	-0.6
2,019,029	+		Pf6N2E2_1710	0.35	-0.7
2,019,029	+		Pf6N2E2_1710	0.35	+0.3
2,019,030	-		Pf6N2E2_1710	0.35	+0.3
2,019,030	-		Pf6N2E2_1710	0.35	+0.3
2,019,030	-		Pf6N2E2_1710	0.35	+0.3
2,019,030	-		Pf6N2E2_1710	0.35	+0.3
2,019,030	-		Pf6N2E2_1710	0.35	+0.3
2,019,030	-		Pf6N2E2_1710	0.35	+0.3
2,019,030	-		Pf6N2E2_1710	0.35	+0.3
2,019,030	-		Pf6N2E2_1710	0.35	+0.3
2,019,031	+		Pf6N2E2_1710	0.35	+0.3
2,019,105	+		Pf6N2E2_1710	0.41	+0.3
2,019,106	-		Pf6N2E2_1710	0.41	+1.3
2,019,123	+		Pf6N2E2_1710	0.42	-0.7
2,019,363	+		Pf6N2E2_1710	0.61	+0.3
2,019,364	-		Pf6N2E2_1710	0.61	+0.3
2,019,364	-		Pf6N2E2_1710	0.61	-0.7
2,019,442	-		Pf6N2E2_1710	0.67	+0.3