Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1640

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,940,977	-		Pf6N2E2_1638	0.56	+0.2
1,941,070	+		Pf6N2E2_1638	0.63	+0.2
1,941,070	+		Pf6N2E2_1638	0.63	+0.2
1,941,071	-		Pf6N2E2_1638	0.63	+0.2
1,941,152	-		Pf6N2E2_1638	0.70	+0.2
1,941,152	-		Pf6N2E2_1638	0.70	-0.8
1,941,190	+		Pf6N2E2_1638	0.73	-0.9
1,941,190	+		Pf6N2E2_1638	0.73	+0.2
1,941,191	-		Pf6N2E2_1638	0.73	+0.2
1,941,191	-		Pf6N2E2_1638	0.73	-0.1
1,941,662	+		Pf6N2E2_1639	0.27	+0.2
1,941,662	+		Pf6N2E2_1639	0.27	+0.2
1,941,664	+		Pf6N2E2_1639	0.27	+0.2
1,941,664	+		Pf6N2E2_1639	0.27	+0.2
1,941,665	-		Pf6N2E2_1639	0.28	+0.7
1,941,665	-		Pf6N2E2_1639	0.28	+0.2
1,941,665	-		Pf6N2E2_1639	0.28	+0.2
1,941,665	-		Pf6N2E2_1639	0.28	+0.7
1,941,754	-		Pf6N2E2_1639	0.50	+0.2
1,941,754	-		Pf6N2E2_1639	0.50	+0.2
1,941,754	-		Pf6N2E2_1639	0.50	+0.2
1,941,754	-		Pf6N2E2_1639	0.50	+0.2
1,941,900	+		Pf6N2E2_1639	0.85	+0.2
1,942,049	-				+0.2
1,942,049	-				+0.2
1,942,049	-				+0.2
1,942,049	-				+0.2
1,942,049	-				-0.8
1,942,049	-				-0.4
1,942,679	+		Pf6N2E2_1640	0.30	-1.3
1,942,680	-		Pf6N2E2_1640	0.30	-1.3
1,942,697	-		Pf6N2E2_1640	0.31	-1.8
1,942,789	+		Pf6N2E2_1640	0.35	+0.2
1,942,829	-		Pf6N2E2_1640	0.36	+0.2
1,942,829	-		Pf6N2E2_1640	0.36	+0.2
1,943,129	+		Pf6N2E2_1640	0.49	-0.8
1,943,129	+		Pf6N2E2_1640	0.49	+0.2
1,943,269	+		Pf6N2E2_1640	0.55	+0.2
1,943,279	-		Pf6N2E2_1640	0.55	-0.8
1,943,413	+		Pf6N2E2_1640	0.61	-0.8
1,943,414	-		Pf6N2E2_1640	0.61	+0.2
1,943,414	-		Pf6N2E2_1640	0.61	+0.2
1,943,699	-		Pf6N2E2_1640	0.73	-1.0
1,943,714	-		Pf6N2E2_1640	0.74	-0.8
1,943,714	-		Pf6N2E2_1640	0.74	-0.8
1,943,787	+		Pf6N2E2_1640	0.77	-0.8
1,943,788	-		Pf6N2E2_1640	0.77	-0.8
1,943,788	-		Pf6N2E2_1640	0.77	-0.8
1,943,956	+		Pf6N2E2_1640	0.84	+0.2
1,943,957	-		Pf6N2E2_1640	0.84	+0.2
1,943,957	-		Pf6N2E2_1640	0.84	-0.8
1,943,957	-		Pf6N2E2_1640	0.84	+0.2
1,943,957	-		Pf6N2E2_1640	0.84	-0.8
1,944,022	+		Pf6N2E2_1640	0.87	-0.8
1,944,023	-		Pf6N2E2_1640	0.87	+0.2
1,944,023	-		Pf6N2E2_1640	0.87	+0.2
1,944,028	+		Pf6N2E2_1640	0.87	-0.1
1,944,028	+		Pf6N2E2_1640	0.87	-1.1
1,944,028	+		Pf6N2E2_1640	0.87	+0.2
1,944,029	-		Pf6N2E2_1640	0.87	+0.2
1,944,088	+		Pf6N2E2_1640	0.89	+0.2
1,944,089	-		Pf6N2E2_1640	0.89	+0.2
1,944,161	-				+0.2
1,944,220	+				-0.8
1,944,220	+				+0.2
1,944,220	+				+0.2
1,944,221	-				+0.2
1,944,221	-				-0.8
1,944,424	-				+0.2
1,944,424	-				+0.2
1,944,425	+				+0.2
1,944,425	+				-0.8
1,944,487	+				+0.2
1,944,487	+				-0.4
1,944,488	-				+0.2
1,944,518	+				+0.2
1,944,518	+				+0.2
1,944,518	+				-0.8
1,944,519	-				+0.2
1,944,519	-				+0.2
1,944,519	-				-0.2
1,944,582	-				+1.2
1,944,582	-				+0.2
1,944,582	-				+0.2
1,944,618	+				-1.3
1,944,618	+				-0.6
1,944,619	-				+0.2
1,944,629	+				+0.2
1,944,629	+				+0.2
1,944,629	+				-1.0
1,944,629	+				-1.2
1,944,629	+				-0.8
1,944,630	-				+0.2
1,944,630	-				+0.2
1,944,630	-				+1.2
1,944,633	+				+0.2
1,944,633	+				+0.2
1,944,634	-				-0.8
1,944,634	-				+0.2
1,944,803	-		Pf6N2E2_1641	0.13	-1.3
1,945,132	+		Pf6N2E2_1641	0.46	+0.2
1,945,162	+		Pf6N2E2_1641	0.49	-0.6
1,945,162	+		Pf6N2E2_1641	0.49	+0.2
1,945,163	-		Pf6N2E2_1641	0.49	-1.8
1,945,319	-		Pf6N2E2_1641	0.65	-1.6