Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1429

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,677,708	+		Pf6N2E2_1428	0.42	-0.8
1,677,708	+		Pf6N2E2_1428	0.42	-0.4
1,677,709	-		Pf6N2E2_1428	0.42	+0.2
1,677,709	-		Pf6N2E2_1428	0.42	-0.8
1,677,709	-		Pf6N2E2_1428	0.42	+0.8
1,677,709	-		Pf6N2E2_1428	0.42	+0.2
1,677,732	+		Pf6N2E2_1428	0.44	-0.2
1,677,732	+		Pf6N2E2_1428	0.44	+0.2
1,677,732	+		Pf6N2E2_1428	0.44	+0.2
1,677,733	-		Pf6N2E2_1428	0.44	-0.8
1,677,733	-		Pf6N2E2_1428	0.44	+0.2
1,677,733	-		Pf6N2E2_1428	0.44	-0.4
1,677,780	-		Pf6N2E2_1428	0.48	+0.2
1,677,780	-		Pf6N2E2_1428	0.48	-0.8
1,677,853	-		Pf6N2E2_1428	0.55	-0.2
1,677,873	-		Pf6N2E2_1428	0.57	+0.2
1,678,152	-		Pf6N2E2_1428	0.82	-0.3
1,678,152	-		Pf6N2E2_1428	0.82	-1.5
1,678,176	+		Pf6N2E2_1428	0.84	-0.7
1,678,177	-		Pf6N2E2_1428	0.84	+0.2
1,678,395	+				-1.3
1,678,440	+				+0.2
1,678,441	-				-1.3
1,678,441	-				-0.8
1,678,441	-				+0.2
1,678,588	+		Pf6N2E2_1429	0.14	+1.2
1,678,588	+		Pf6N2E2_1429	0.14	+0.2
1,678,588	+		Pf6N2E2_1429	0.14	+0.6
1,678,588	+		Pf6N2E2_1429	0.14	-2.6
1,678,589	-		Pf6N2E2_1429	0.14	+0.2
1,678,589	-		Pf6N2E2_1429	0.14	+0.2
1,678,589	-		Pf6N2E2_1429	0.14	-0.4
1,678,589	-		Pf6N2E2_1429	0.14	-0.8
1,678,589	-		Pf6N2E2_1429	0.14	-0.8
1,678,589	-		Pf6N2E2_1429	0.14	+0.2
1,679,106	-		Pf6N2E2_1429	0.82	-0.5
1,679,195	-				-0.8
1,679,263	+				-0.5
1,679,630	+		Pf6N2E2_1430	0.25	-0.5
1,679,664	+		Pf6N2E2_1430	0.27	-1.3
1,679,664	+		Pf6N2E2_1430	0.27	+0.5
1,679,664	+		Pf6N2E2_1430	0.27	+0.3
1,679,665	-		Pf6N2E2_1430	0.28	+0.3
1,679,665	-		Pf6N2E2_1430	0.28	+0.3
1,679,667	+		Pf6N2E2_1430	0.28	+0.3
1,679,668	-		Pf6N2E2_1430	0.28	+0.3
1,679,720	+		Pf6N2E2_1430	0.32	+0.3
1,679,721	-		Pf6N2E2_1430	0.32	+0.3
1,679,957	-		Pf6N2E2_1430	0.50	+0.3
1,680,024	+		Pf6N2E2_1430	0.55	+0.3
1,680,084	+		Pf6N2E2_1430	0.59	+0.3
1,680,085	-		Pf6N2E2_1430	0.59	+0.3
1,680,144	+		Pf6N2E2_1430	0.64	+0.3
1,680,145	-		Pf6N2E2_1430	0.64	+0.3
1,680,148	+		Pf6N2E2_1430	0.64	+0.3
1,680,148	+		Pf6N2E2_1430	0.64	-0.7
1,680,149	-		Pf6N2E2_1430	0.64	-0.4
1,680,149	-		Pf6N2E2_1430	0.64	-0.7
1,680,149	-		Pf6N2E2_1430	0.64	-2.0