Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1273

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,503,317	-		Pf6N2E2_1272	0.76	-0.8
1,503,443	+		Pf6N2E2_1272	0.80	+0.2
1,503,443	+		Pf6N2E2_1272	0.80	+0.2
1,503,674	-		Pf6N2E2_1272	0.88	+0.2
1,503,785	+				+0.2
1,504,255	+		Pf6N2E2_1273	0.15	-2.1
1,504,256	-		Pf6N2E2_1273	0.15	-1.8
1,504,324	-		Pf6N2E2_1273	0.21	+0.2
1,504,815	+		Pf6N2E2_1273	0.58	+0.2
1,504,816	-		Pf6N2E2_1273	0.58	+0.2
1,504,901	+		Pf6N2E2_1273	0.65	+0.2
1,504,972	-		Pf6N2E2_1273	0.70	-0.8
1,505,115	+		Pf6N2E2_1273	0.81	-0.8
1,505,115	+		Pf6N2E2_1273	0.81	+0.2
1,505,116	-		Pf6N2E2_1273	0.81	-0.8
1,505,300	+				-0.8
1,505,300	+				+0.2
1,505,301	-				-0.8
1,505,451	+				+0.2
1,505,452	-				+0.2
1,505,463	-				+0.2
1,505,538	+				-1.4
1,505,545	+				+0.2
1,505,546	-				-1.8
1,505,546	-				+0.2
1,505,577	+				-0.8
1,505,578	-				+0.2
1,505,700	+		Pf6N2E2_1274	0.30	-0.4
1,506,119	+				+0.2
1,506,120	-				-0.5
1,506,120	-				+0.2
1,506,132	-				-1.1