Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1269

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,494,283	-				-0.5
1,494,298	+				+0.2
1,494,298	+				+0.2
1,494,298	+				-0.8
1,494,299	-				+0.2
1,494,299	-				+0.1
1,494,478	+		Pf6N2E2_1268	0.27	+0.2
1,494,479	-		Pf6N2E2_1268	0.27	-0.8
1,494,479	-		Pf6N2E2_1268	0.27	+0.2
1,494,479	-		Pf6N2E2_1268	0.27	+0.2
1,494,479	-		Pf6N2E2_1268	0.27	+0.2
1,494,479	-		Pf6N2E2_1268	0.27	-1.4
1,494,635	+		Pf6N2E2_1268	0.46	-0.8
1,494,671	-		Pf6N2E2_1268	0.50	+0.2
1,494,697	+		Pf6N2E2_1268	0.54	-1.1
1,494,697	+		Pf6N2E2_1268	0.54	+0.2
1,494,698	-		Pf6N2E2_1268	0.54	-1.4
1,494,698	-		Pf6N2E2_1268	0.54	-0.2
1,494,698	-		Pf6N2E2_1268	0.54	-1.9
1,494,698	-		Pf6N2E2_1268	0.54	+0.2
1,494,698	-		Pf6N2E2_1268	0.54	+0.2
1,494,698	-		Pf6N2E2_1268	0.54	-1.4
1,494,805	+		Pf6N2E2_1268	0.67	+0.2
1,494,806	-		Pf6N2E2_1268	0.67	+0.2
1,494,806	-		Pf6N2E2_1268	0.67	+0.2
1,494,895	+		Pf6N2E2_1268	0.77	+0.2
1,494,896	-		Pf6N2E2_1268	0.77	-0.3
1,495,122	-				+0.2
1,495,222	+				+0.5
1,495,222	+		Pf6N2E2_1269	0.16	+0.2
1,495,222	+		Pf6N2E2_1269	0.16	-0.7
1,495,223	-		Pf6N2E2_1269	0.16	+0.2
1,495,223	-		Pf6N2E2_1269	0.16	+0.2
1,495,223	-		Pf6N2E2_1269	0.16	+0.2
1,495,223	-		Pf6N2E2_1269	0.16	+0.2
1,495,324	+		Pf6N2E2_1269	0.29	-0.3
1,495,325	-		Pf6N2E2_1269	0.29	+0.2
1,495,325	-		Pf6N2E2_1269	0.29	-0.6
1,495,325	-		Pf6N2E2_1269	0.29	+0.2
1,495,383	-		Pf6N2E2_1269	0.36	-2.1
1,495,385	-		Pf6N2E2_1269	0.36	+0.2
1,495,656	+		Pf6N2E2_1269	0.70	+0.2
1,495,656	+		Pf6N2E2_1269	0.70	+0.2
1,495,657	-		Pf6N2E2_1269	0.70	+0.2
1,495,704	+		Pf6N2E2_1269	0.76	+0.2
1,495,867	-				-1.4
1,495,892	-				+0.2
1,495,892	-				+0.2
1,495,939	+				+0.2
1,495,939	+				-0.2
1,495,939	+				+0.2
1,495,939	+				+0.2
1,495,940	-				+1.2
1,495,940	-				+0.2
1,495,965	-				+0.2
1,496,166	-				-0.5
1,496,169	-				+0.2
1,496,342	-				-0.8
1,496,342	-				+0.2
1,496,342	-				+0.2
1,496,363	-		Pf6N2E2_1270	0.11	+0.2
1,496,459	-		Pf6N2E2_1270	0.18	+0.2
1,496,459	-		Pf6N2E2_1270	0.18	-1.8
1,496,500	+		Pf6N2E2_1270	0.21	+0.2
1,496,500	+		Pf6N2E2_1270	0.21	-0.8
1,496,521	+		Pf6N2E2_1270	0.22	-0.8
1,496,522	-		Pf6N2E2_1270	0.22	+0.2
1,496,535	-		Pf6N2E2_1270	0.23	+0.2
1,496,635	+		Pf6N2E2_1270	0.30	+0.6
1,496,636	-		Pf6N2E2_1270	0.30	+0.2
1,496,639	+		Pf6N2E2_1270	0.30	+0.2
1,496,639	+		Pf6N2E2_1270	0.30	+0.2
1,496,650	+				+0.2
1,496,686	+		Pf6N2E2_1270	0.33	-2.6
1,496,686	+		Pf6N2E2_1270	0.33	-0.5