Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1248

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,458,844	+		Pf6N2E2_1245	0.82	+0.2
1,458,845	-		Pf6N2E2_1245	0.82	+0.2
1,458,845	-		Pf6N2E2_1245	0.82	+0.2
1,458,847	+		Pf6N2E2_1245	0.82	-0.8
1,458,848	-		Pf6N2E2_1245	0.83	+0.2
1,458,848	-		Pf6N2E2_1245	0.83	-1.4
1,458,848	-		Pf6N2E2_1245	0.83	+0.2
1,458,850	+		Pf6N2E2_1245	0.83	+0.2
1,459,025	+		Pf6N2E2_1246	0.34	+0.2
1,459,026	-		Pf6N2E2_1246	0.35	+0.2
1,459,026	-		Pf6N2E2_1246	0.35	-0.8
1,459,155	+				+0.2
1,459,155	+				+0.2
1,459,204	-				+0.2
1,459,282	+		Pf6N2E2_1247	0.10	-0.8
1,459,282	+		Pf6N2E2_1247	0.10	+0.2
1,459,301	-		Pf6N2E2_1247	0.20	-0.6
1,459,301	-		Pf6N2E2_1247	0.20	+0.2
1,459,362	+		Pf6N2E2_1247	0.53	+0.2
1,459,362	+		Pf6N2E2_1247	0.53	-0.8
1,459,362	+		Pf6N2E2_1247	0.53	+0.2
1,459,362	+		Pf6N2E2_1247	0.53	+0.2
1,459,362	+		Pf6N2E2_1247	0.53	+0.2
1,459,363	-		Pf6N2E2_1247	0.54	+0.2
1,459,547	-				-0.6
1,459,547	-				+0.4
1,459,553	-				-1.1
1,459,593	+				-1.1
1,459,594	-				-0.8
1,459,594	-				+0.2
1,459,632	+				-1.8
1,459,652	+				+0.2
1,459,694	+				+0.2
1,459,694	+				+0.2
1,459,695	-				+0.2
1,459,695	-				-0.8
1,459,696	+				+0.2
1,459,696	+				-0.8
1,459,696	+				+0.2
1,459,697	-				-0.9
1,459,706	+				-0.8
1,459,706	+				+0.8
1,459,859	+		Pf6N2E2_1248	0.34	+0.2
1,459,860	-		Pf6N2E2_1248	0.35	-0.8
1,459,919	+		Pf6N2E2_1248	0.51	-0.8
1,459,919	+		Pf6N2E2_1248	0.51	-0.8
1,459,919	+				+0.2
1,460,094	+				-1.1
1,460,094	+				+0.2
1,460,094	+				-1.8
1,460,094	+				-0.8
1,460,094	+				+0.5
1,460,094	+				+0.2
1,460,124	-				+0.2
1,460,166	-				+0.2
1,460,220	+				-0.8
1,460,221	-				+0.2
1,460,221	-				+0.2
1,460,399	+		Pf6N2E2_1249	0.17	-0.8
1,460,400	-		Pf6N2E2_1249	0.17	+0.2
1,460,432	+		Pf6N2E2_1249	0.21	-0.8
1,460,495	+		Pf6N2E2_1249	0.27	-0.8
1,460,552	+		Pf6N2E2_1249	0.34	-0.8
1,460,552	+		Pf6N2E2_1249	0.34	+0.2
1,460,634	+		Pf6N2E2_1249	0.42	-0.4
1,460,635	-		Pf6N2E2_1249	0.43	+0.2
1,460,963	+		Pf6N2E2_1249	0.78	-0.8