Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1149

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,345,789	+		Pf6N2E2_1148	0.31	+0.3
1,346,012	+		Pf6N2E2_1148	0.50	+0.3
1,346,392	+		Pf6N2E2_1148	0.83	+0.3
1,346,393	-		Pf6N2E2_1148	0.84	+0.3
1,346,393	-		Pf6N2E2_1148	0.84	-1.2
1,346,393	-		Pf6N2E2_1148	0.84	-0.7
1,346,396	+		Pf6N2E2_1148	0.84	-0.7
1,346,418	+		Pf6N2E2_1148	0.86	+0.3
1,346,703	+		Pf6N2E2_1149	0.11	+0.3
1,346,703	+		Pf6N2E2_1149	0.11	-0.7
1,346,704	-		Pf6N2E2_1149	0.11	-0.7
1,346,704	-		Pf6N2E2_1149	0.11	-0.1
1,346,862	+		Pf6N2E2_1149	0.25	+0.3
1,346,863	-		Pf6N2E2_1149	0.25	-0.7
1,347,038	+		Pf6N2E2_1149	0.41	-0.4
1,347,038	+		Pf6N2E2_1149	0.41	-0.0
1,347,121	+		Pf6N2E2_1149	0.48	+0.3
1,347,121	+		Pf6N2E2_1149	0.48	-1.6
1,347,122	-		Pf6N2E2_1149	0.48	+1.0
1,347,122	-		Pf6N2E2_1149	0.48	+0.3
1,347,122	-		Pf6N2E2_1149	0.48	+1.8
1,347,122	-		Pf6N2E2_1149	0.48	+0.3
1,347,122	-		Pf6N2E2_1149	0.48	+0.3
1,347,166	+		Pf6N2E2_1149	0.52	-0.0
1,347,166	+		Pf6N2E2_1149	0.52	+0.3
1,347,167	-		Pf6N2E2_1149	0.52	-0.7
1,347,167	-		Pf6N2E2_1149	0.52	+0.3
1,347,202	+		Pf6N2E2_1149	0.56	+0.3
1,347,436	+		Pf6N2E2_1149	0.77	+0.3
1,347,437	-		Pf6N2E2_1149	0.77	+0.3
1,347,738	+				+0.3
1,347,739	-				+0.3
1,347,807	+				+0.3
1,347,807	+				+0.3
1,347,808	-				-0.2
1,347,811	+				+0.3
1,347,811	+				-0.7
1,347,812	-				+0.3
1,347,812	-				-0.7
1,347,812	-				-1.3
1,347,812	-				-1.0
1,347,812	-				-0.6
1,347,812	-				+0.3
1,348,063	+		Pf6N2E2_1150	0.33	+0.3
1,348,063	+		Pf6N2E2_1150	0.33	-0.7
1,348,065	+		Pf6N2E2_1150	0.34	+0.7
1,348,065	+		Pf6N2E2_1150	0.34	+0.3
1,348,065	+		Pf6N2E2_1150	0.34	+0.3
1,348,141	+		Pf6N2E2_1150	0.44	-0.8
1,348,268	+		Pf6N2E2_1150	0.62	-0.6
1,348,268	+		Pf6N2E2_1150	0.62	+0.3
1,348,269	-		Pf6N2E2_1150	0.62	+0.3
1,348,269	-		Pf6N2E2_1150	0.62	+0.3
1,348,269	-		Pf6N2E2_1150	0.62	+0.3
1,348,669	+				-0.5
1,348,670	-				+0.3
1,348,670	-				-0.4
1,348,670	-				-0.3