Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1146

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,343,270	+				+0.3
1,343,270	+				+0.3
1,343,271	-				-0.7
1,343,271	-				-0.7
1,343,271	-				+0.3
1,343,273	+				+0.3
1,343,281	+				+0.3
1,343,281	+				-2.1
1,343,282	-				-0.7
1,343,282	-				+0.3
1,343,282	-				-0.7
1,343,483	+		Pf6N2E2_1146	0.18	+0.3
1,343,483	+		Pf6N2E2_1146	0.18	+0.3
1,343,720	+		Pf6N2E2_1146	0.39	-0.7
1,343,720	+		Pf6N2E2_1146	0.39	+0.3
1,343,720	+		Pf6N2E2_1146	0.39	-0.7
1,343,720	+		Pf6N2E2_1146	0.39	+0.3
1,343,720	+		Pf6N2E2_1146	0.39	+0.3
1,343,721	-		Pf6N2E2_1146	0.39	-0.4
1,343,721	-		Pf6N2E2_1146	0.39	+0.3
1,343,972	+		Pf6N2E2_1146	0.61	+0.3
1,343,972	+		Pf6N2E2_1146	0.61	-0.7
1,343,973	-		Pf6N2E2_1146	0.61	+0.3
1,344,068	+		Pf6N2E2_1146	0.69	+0.3
1,344,069	-		Pf6N2E2_1146	0.70	+1.3
1,344,179	+		Pf6N2E2_1146	0.79	+0.3
1,344,362	+				+0.3
1,344,362	+				+0.3
1,344,362	+				+1.8
1,344,363	-				-1.3
1,344,363	-				-1.7
1,344,363	-				-0.7
1,344,363	-				+0.3
1,344,363	-				-0.7
1,344,433	-				-0.7
1,344,433	-				-2.3
1,344,433	-				-0.7
1,344,660	+		Pf6N2E2_1147	0.30	-2.8
1,344,661	-		Pf6N2E2_1147	0.30	+0.3
1,345,031	+		Pf6N2E2_1147	0.78	+0.3
1,345,032	-				+0.3
1,345,193	+				-0.7
1,345,193	+				+0.3
1,345,193	+				+0.3
1,345,194	-				+0.3
1,345,197	+				-0.7
1,345,197	+				-0.7
1,345,197	+				-1.5
1,345,197	+				+0.3
1,345,198	-				+0.3