Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1046

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,219,179	+				-0.6
1,219,329	-				+0.3
1,219,514	+				+1.3
1,219,515	-				-0.7
1,219,515	-				+1.0
1,219,515	-				+0.6
1,219,562	-				-1.1
1,219,572	+				+0.3
1,219,573	-				-0.7
1,219,587	-				+0.3
1,219,640	+				-2.7
1,219,641	-				-0.7
1,219,641	-				+0.3
1,219,658	+				+0.3
1,219,715	+				+0.3
1,219,782	+				-0.8
1,219,783	-				-0.8
1,219,783	-				+0.3
1,219,789	+				-1.7
1,219,789	+				+0.3
1,219,790	-				-0.7
1,219,819	+				+0.3
1,219,819	+				+0.3
1,219,819	+				+0.3
1,219,819	+				+0.3
1,219,820	-				+0.3
1,219,820	-				-0.3
1,219,909	-				-1.3
1,219,968	+				-0.9
1,219,968	+				+0.3
1,220,001	-				-1.4
1,220,067	+				+0.3
1,220,067	+				-1.3
1,220,067	+				+0.3
1,220,067	+				+0.3
1,220,068	-				+0.3
1,220,121	+				+0.3
1,220,122	-				+0.3
1,220,122	-				+0.3
1,220,157	+				-0.5
1,220,211	+				+0.3
1,220,212	-				-0.7
1,220,388	+		Pf6N2E2_1046	0.30	+0.3
1,220,389	-		Pf6N2E2_1046	0.30	-0.7
1,220,434	-		Pf6N2E2_1046	0.36	-0.7
1,220,642	-		Pf6N2E2_1046	0.61	+0.3
1,220,737	+		Pf6N2E2_1046	0.73	-0.2
1,220,781	+		Pf6N2E2_1046	0.78	-0.7
1,220,782	-		Pf6N2E2_1046	0.78	+0.3
1,220,811	-		Pf6N2E2_1046	0.82	+0.3
1,221,053	-				+0.3
1,221,101	+		Pf6N2E2_1047	0.11	+0.3
1,221,208	+		Pf6N2E2_1047	0.22	+0.3
1,221,209	-		Pf6N2E2_1047	0.22	+0.3
1,221,209	-		Pf6N2E2_1047	0.22	-1.3
1,221,300	+		Pf6N2E2_1047	0.31	+0.3
1,221,300	+		Pf6N2E2_1047	0.31	+0.3
1,221,301	-		Pf6N2E2_1047	0.31	+0.3
1,221,301	-		Pf6N2E2_1047	0.31	-1.0
1,221,301	-		Pf6N2E2_1047	0.31	-0.7
1,221,301	-		Pf6N2E2_1047	0.31	-0.1
1,221,367	+		Pf6N2E2_1047	0.38	-0.7
1,221,367	+		Pf6N2E2_1047	0.38	-0.7
1,221,368	-		Pf6N2E2_1047	0.38	-0.5
1,221,368	-		Pf6N2E2_1047	0.38	+0.3
1,221,368	-		Pf6N2E2_1047	0.38	-0.2
1,221,733	+		Pf6N2E2_1047	0.74	+0.3