Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1011

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,180,040	+		Pf6N2E2_1010	0.44	+0.3
1,180,253	+		Pf6N2E2_1010	0.61	-0.7
1,180,307	+		Pf6N2E2_1010	0.66	-0.3
1,180,308	-		Pf6N2E2_1010	0.66	+0.3
1,180,358	+		Pf6N2E2_1010	0.70	+0.3
1,180,413	+		Pf6N2E2_1010	0.75	+0.3
1,180,424	+		Pf6N2E2_1010	0.75	-0.7
1,180,424	+		Pf6N2E2_1010	0.75	-1.3
1,180,424	+		Pf6N2E2_1010	0.75	+0.3
1,180,425	-		Pf6N2E2_1010	0.76	-0.3
1,180,577	+		Pf6N2E2_1010	0.88	-0.5
1,180,577	+		Pf6N2E2_1010	0.88	-2.7
1,180,577	+		Pf6N2E2_1010	0.88	+0.3
1,180,580	+		Pf6N2E2_1010	0.88	-1.3
1,180,580	+		Pf6N2E2_1010	0.88	-1.0
1,180,580	+		Pf6N2E2_1010	0.88	-0.6
1,180,580	+		Pf6N2E2_1010	0.88	+0.3
1,180,580	+		Pf6N2E2_1010	0.88	-0.7
1,180,580	+		Pf6N2E2_1010	0.88	-1.3
1,180,580	+		Pf6N2E2_1010	0.88	-0.7
1,180,580	+		Pf6N2E2_1010	0.88	+0.3
1,180,580	+		Pf6N2E2_1010	0.88	-0.7
1,180,580	+		Pf6N2E2_1010	0.88	-0.4
1,180,580	+		Pf6N2E2_1010	0.88	-0.5
1,180,581	-		Pf6N2E2_1010	0.88	+0.3
1,180,581	-		Pf6N2E2_1010	0.88	+0.3
1,180,581	-		Pf6N2E2_1010	0.88	-0.7
1,180,586	+		Pf6N2E2_1010	0.89	-1.0
1,180,586	+		Pf6N2E2_1010	0.89	-1.1
1,180,586	+		Pf6N2E2_1010	0.89	+1.3
1,180,587	-		Pf6N2E2_1010	0.89	+0.3
1,180,669	+				-0.7
1,180,669	+				-0.7
1,180,709	+				+0.3
1,180,709	+				+0.3
1,180,709	+				+0.3
1,180,721	+				+0.3
1,180,721	+				-0.7
1,180,721	+				-0.7
1,180,743	+				+0.3
1,180,743	+				-1.1
1,180,743	+				-1.3
1,180,743	+				-0.8
1,180,779	+				-1.3
1,180,779	+				+0.3
1,180,779	+				-0.4
1,180,779	+				-0.1
1,180,779	+				+0.3
1,180,779	+				+0.3
1,180,779	+				-1.3
1,180,779	+				+0.3
1,180,779	+				+0.3
1,180,779	+				+0.3
1,180,780	-				-2.6
1,180,785	+				+0.3
1,180,785	+				+0.3
1,180,785	+				+0.3
1,180,786	-				-1.3
1,180,786	-				-0.7
1,180,786	-				+0.3
1,180,790	-				-1.3
1,180,811	+				-0.7
1,180,811	+				-0.7
1,180,811	+				-0.7
1,180,812	-				+0.3
1,180,812	-				+0.3
1,180,812	-				-1.3
1,180,858	+				+0.3
1,180,934	-				+0.3
1,180,978	-				+0.3
1,180,978	-				+0.3
1,180,978	-				+0.3
1,180,978	-				+0.3
1,180,980	+				+0.3
1,180,981	-				-0.5
1,180,981	-				+0.3
1,181,009	+				+0.3
1,181,009	+				-0.7
1,181,009	+				+0.3
1,181,010	-				-0.7
1,181,094	+		Pf6N2E2_1011	0.47	+0.3
1,181,094	+		Pf6N2E2_1011	0.47	+0.3
1,181,094	+		Pf6N2E2_1011	0.47	+0.3
1,181,095	-		Pf6N2E2_1011	0.47	+0.3
1,181,118	+		Pf6N2E2_1011	0.64	+2.6
1,181,118	+		Pf6N2E2_1011	0.64	+0.3
1,181,118	+				+0.3
1,181,118	+		Pf6N2E2_1011	0.64	+0.3
1,181,119	-		Pf6N2E2_1011	0.65	+0.3
1,181,211	+				+0.3
1,181,227	+				+0.3
1,181,239	+				-0.7
1,181,254	+				+0.3
1,181,285	-				+0.3
1,181,421	-				+0.3
1,181,460	-				-0.7
1,181,474	+				+0.3
1,181,474	+				+0.3
1,181,553	-				+0.3
1,181,796	+				-0.7
1,181,899	+				+0.3
1,182,119	-				+0.3