Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_988

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,154,865	-				+0.3
1,155,037	+				+0.3
1,155,038	-				+0.3
1,155,050	+				-3.3
1,155,122	+				+0.3
1,155,122	+				+0.3
1,155,122	+				+0.3
1,155,123	-				-0.3
1,155,141	+				+0.3
1,155,172	+				-0.7
1,155,173	-				+0.3
1,155,299	+		Pf6N2E2_986	0.31	-1.1
1,155,493	+		Pf6N2E2_987	0.48	+0.3
1,155,500	+		Pf6N2E2_987	0.51	+0.3
1,155,500	+		Pf6N2E2_987	0.51	+0.5
1,155,541	-		Pf6N2E2_987	0.68	+0.3
1,155,541	-		Pf6N2E2_987	0.68	+0.3
1,155,603	+				-1.8
1,155,604	-				+0.3
1,155,803	+				-0.6
1,155,865	+				-0.3
1,155,865	+				-0.1
1,155,865	+				-1.3
1,155,865	+				-1.3
1,155,866	-				+0.1
1,155,866	-				-0.7
1,155,866	-				+0.3
1,155,955	-		Pf6N2E2_988	0.11	+0.3
1,156,079	-		Pf6N2E2_988	0.25	-0.7
1,156,136	+		Pf6N2E2_988	0.32	-1.1
1,156,463	-		Pf6N2E2_988	0.70	+0.3
1,156,500	-		Pf6N2E2_988	0.74	+0.4
1,156,589	+		Pf6N2E2_988	0.84	+0.3
1,156,663	+				+0.3
1,156,664	-				+0.3
1,156,664	-				-0.6
1,156,679	+				+0.3
1,156,679	+				+0.3
1,156,688	-				-1.3
1,156,737	-				+0.3
1,156,797	+				+0.3
1,156,798	-				+1.3
1,156,798	-				+0.3
1,156,850	+				+0.3
1,156,850	+				+0.3
1,156,850	+				-0.7
1,156,850	+				-0.7
1,156,850	+				-1.3
1,156,850	+				+0.3
1,156,851	-				+0.3
1,156,851	-				+0.3
1,156,851	-				+0.3
1,156,851	-				-0.7
1,156,851	-				+0.3
1,156,851	-				-0.4
1,156,851	-				+0.3
1,156,851	-				+0.3
1,156,851	-				-0.7
1,156,896	+				-0.7
1,156,896	+				-0.0
1,156,923	+		Pf6N2E2_989	0.10	+0.3
1,156,924	-		Pf6N2E2_989	0.10	+0.3
1,156,926	+		Pf6N2E2_989	0.11	-0.5
1,156,927	-		Pf6N2E2_989	0.11	+0.3
1,156,927	-				+0.3
1,156,927	-		Pf6N2E2_989	0.11	+0.3
1,157,018	+		Pf6N2E2_989	0.21	-0.7
1,157,018	+		Pf6N2E2_989	0.21	+0.3
1,157,018	+		Pf6N2E2_989	0.21	-1.3
1,157,018	+		Pf6N2E2_989	0.21	+0.3
1,157,018	+		Pf6N2E2_989	0.21	-0.5
1,157,019	-		Pf6N2E2_989	0.21	+0.3
1,157,019	-		Pf6N2E2_989	0.21	+0.3
1,157,057	+		Pf6N2E2_989	0.25	+0.3
1,157,057	+		Pf6N2E2_989	0.25	+0.3
1,157,292	+		Pf6N2E2_989	0.51	-0.6
1,157,293	-		Pf6N2E2_989	0.51	-1.3
1,157,303	+		Pf6N2E2_989	0.52	-0.7
1,157,303	+		Pf6N2E2_989	0.52	+0.3
1,157,303	+		Pf6N2E2_989	0.52	-0.9
1,157,303	+		Pf6N2E2_989	0.52	-0.3
1,157,303	+		Pf6N2E2_989	0.52	+0.3
1,157,303	+		Pf6N2E2_989	0.52	+0.3
1,157,304	-		Pf6N2E2_989	0.52	+0.3
1,157,304	-		Pf6N2E2_989	0.52	+0.3
1,157,334	+		Pf6N2E2_989	0.55	-0.7
1,157,334	+		Pf6N2E2_989	0.55	-1.3
1,157,335	-		Pf6N2E2_989	0.55	-0.7
1,157,335	-		Pf6N2E2_989	0.55	-1.3
1,157,336	+		Pf6N2E2_989	0.56	-0.7
1,157,336	+		Pf6N2E2_989	0.56	+0.3
1,157,336	+		Pf6N2E2_989	0.56	-0.5
1,157,336	+		Pf6N2E2_989	0.56	-0.7
1,157,336	+		Pf6N2E2_989	0.56	-0.0
1,157,336	+		Pf6N2E2_989	0.56	+0.3
1,157,336	+		Pf6N2E2_989	0.56	+0.3
1,157,336	+		Pf6N2E2_989	0.56	+0.3
1,157,336	+		Pf6N2E2_989	0.56	+0.3
1,157,336	+		Pf6N2E2_989	0.56	+0.3
1,157,336	+		Pf6N2E2_989	0.56	-0.9
1,157,336	+		Pf6N2E2_989	0.56	-0.7
1,157,336	+		Pf6N2E2_989	0.56	+0.3
1,157,336	+		Pf6N2E2_989	0.56	-0.7
1,157,337	-		Pf6N2E2_989	0.56	-0.2
1,157,337	-		Pf6N2E2_989	0.56	+0.3
1,157,337	-		Pf6N2E2_989	0.56	+0.3
1,157,337	-		Pf6N2E2_989	0.56	+1.3
1,157,337	-		Pf6N2E2_989	0.56	+0.6
1,157,337	-		Pf6N2E2_989	0.56	+0.3
1,157,337	-		Pf6N2E2_989	0.56	+0.3
1,157,353	+		Pf6N2E2_989	0.57	-0.9
1,157,354	-		Pf6N2E2_989	0.57	+0.3
1,157,573	+		Pf6N2E2_989	0.81	+0.3
1,157,574	-		Pf6N2E2_989	0.82	+0.3
1,157,574	-		Pf6N2E2_989	0.82	-0.7
1,157,623	+		Pf6N2E2_989	0.87	+0.3
1,157,654	+				+0.3
1,157,711	+				+0.3
1,157,712	-				-1.0