Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_933

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,098,516	-		Pf6N2E2_932	0.54	-1.3
1,098,516	-		Pf6N2E2_932	0.54	-0.7
1,098,516	-		Pf6N2E2_932	0.54	-1.3
1,098,560	-		Pf6N2E2_932	0.58	+0.3
1,098,560	-		Pf6N2E2_932	0.58	+0.3
1,098,608	+				+0.3
1,098,609	-		Pf6N2E2_932	0.62	-0.5
1,098,665	-		Pf6N2E2_932	0.67	-0.7
1,098,746	+		Pf6N2E2_932	0.73	-0.7
1,098,747	-		Pf6N2E2_932	0.73	+0.3
1,098,747	-		Pf6N2E2_932	0.73	-0.4
1,098,989	+				+0.3
1,098,993	+				+0.3
1,099,109	+				+0.3
1,099,110	-				-0.1
1,099,169	+				+0.3
1,099,259	-				+0.3
1,099,260	+				+0.3
1,099,261	-				+0.3
1,099,261	-				+0.3
1,099,261	-				-1.7
1,099,261	-				+0.3
1,099,277	+				+0.3
1,099,396	+				+0.3
1,099,397	-				+0.3
1,099,534	-				+0.3
1,099,534	-				+0.3
1,099,545	+				+0.3
1,099,556	+				+0.3
1,099,557	-				-0.7
1,099,620	+		Pf6N2E2_933	0.17	-0.7
1,099,620	+		Pf6N2E2_933	0.17	+0.3
1,099,621	-		Pf6N2E2_933	0.18	+0.3
1,099,621	-		Pf6N2E2_933	0.18	-0.8
1,099,650	-		Pf6N2E2_933	0.22	+0.3
1,099,825	+		Pf6N2E2_933	0.50	+0.3
1,099,889	+		Pf6N2E2_933	0.61	-0.6
1,099,889	+		Pf6N2E2_933	0.61	-0.7
1,100,118	+				+1.3
1,100,119	-				+0.3
1,100,119	-				+0.3
1,100,119	-				-0.7
1,100,119	-				+0.3
1,100,119	-				-0.7
1,100,288	+				+0.3
1,100,289	-				-0.7
1,100,289	-				+0.3
1,100,427	-				+0.3
1,100,469	-				+0.3
1,100,648	-				+0.3
1,100,704	+				+0.3
1,100,830	+				+0.3
1,100,830	+				+0.3
1,100,830	+				+0.3
1,100,830	+				+0.3
1,100,831	-				+0.3
1,100,831	-				+0.3
1,100,831	-				-0.7
1,100,831	-				+0.3
1,100,831	-				-0.7
1,100,831	-				-0.7
1,100,831	-				+0.3
1,100,831	-				+0.3
1,100,880	+				+0.3
1,101,044	-				-0.4
1,101,106	-				-0.7