Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_906

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,059,668	+		Pf6N2E2_904	0.79	+0.3
1,059,723	+		Pf6N2E2_904	0.84	-1.3
1,059,730	-		Pf6N2E2_904	0.85	+0.3
1,059,808	+				-0.7
1,059,846	+				+0.3
1,059,982	+				+0.3
1,059,983	-				-1.3
1,060,056	-				-0.7
1,060,091	+				+0.3
1,060,092	-				+0.3
1,060,097	+				-0.6
1,060,124	+				+0.3
1,060,124	+				+0.3
1,060,140	-				-0.5
1,060,263	+				+0.3
1,060,368	-		Pf6N2E2_905	0.38	+0.4
1,060,368	-		Pf6N2E2_905	0.38	-0.5
1,060,419	-		Pf6N2E2_905	0.53	-0.7
1,060,486	+		Pf6N2E2_905	0.73	-1.3
1,060,486	+		Pf6N2E2_905	0.73	+0.0
1,060,487	-		Pf6N2E2_905	0.74	-0.9
1,060,487	-		Pf6N2E2_905	0.74	+0.3
1,060,504	+		Pf6N2E2_905	0.79	+0.3
1,060,505	-		Pf6N2E2_905	0.79	-0.7
1,060,505	-		Pf6N2E2_905	0.79	-0.7
1,060,688	+		Pf6N2E2_906	0.35	-1.3
1,060,689	-		Pf6N2E2_906	0.35	-0.7
1,060,689	-		Pf6N2E2_906	0.35	+0.3
1,060,689	-		Pf6N2E2_906	0.35	-0.7
1,060,861	-		Pf6N2E2_906	0.86	+0.3
1,060,951	-				+0.3
1,060,951	-				-0.7
1,061,016	+				-0.7
1,061,017	-				+0.3
1,061,251	-		Pf6N2E2_907	0.17	+0.3
1,061,251	-		Pf6N2E2_907	0.17	-0.7
1,061,414	+		Pf6N2E2_907	0.28	+0.3
1,061,415	-		Pf6N2E2_907	0.28	+0.3
1,061,559	+		Pf6N2E2_907	0.37	+0.0
1,061,560	-		Pf6N2E2_907	0.37	-0.7
1,061,671	-		Pf6N2E2_907	0.45	+0.3
1,061,676	+		Pf6N2E2_907	0.45	-0.7
1,061,676	+		Pf6N2E2_907	0.45	+0.3
1,061,676	+		Pf6N2E2_907	0.45	-0.7
1,061,677	-		Pf6N2E2_907	0.45	-1.3
1,061,677	-		Pf6N2E2_907	0.45	-1.3
1,061,801	+		Pf6N2E2_907	0.53	-0.7
1,061,801	+		Pf6N2E2_907	0.53	+0.3
1,061,802	-		Pf6N2E2_907	0.53	+0.3