Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_876

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,024,643	+		Pf6N2E2_874	0.26	+0.3
1,024,644	-		Pf6N2E2_874	0.26	+0.3
1,024,713	+		Pf6N2E2_874	0.36	-0.7
1,024,714	-		Pf6N2E2_874	0.36	-0.8
1,024,714	-		Pf6N2E2_874	0.36	-1.3
1,024,715	+		Pf6N2E2_874	0.36	+0.4
1,024,715	+		Pf6N2E2_874	0.36	+0.3
1,024,715	+		Pf6N2E2_874	0.36	-0.4
1,024,716	-		Pf6N2E2_874	0.37	-0.7
1,024,716	-		Pf6N2E2_874	0.37	-1.3
1,024,716	-		Pf6N2E2_874	0.37	+0.3
1,024,730	+		Pf6N2E2_874	0.39	+0.3
1,024,730	+		Pf6N2E2_874	0.39	+0.3
1,024,730	+		Pf6N2E2_874	0.39	+0.3
1,024,730	+		Pf6N2E2_874	0.39	+0.8
1,024,730	+		Pf6N2E2_874	0.39	+0.3
1,024,730	+		Pf6N2E2_874	0.39	-2.1
1,024,731	-		Pf6N2E2_874	0.39	-1.4
1,024,731	-		Pf6N2E2_874	0.39	-0.1
1,024,814	+		Pf6N2E2_874	0.51	+0.3
1,024,815	-		Pf6N2E2_874	0.51	-0.7
1,024,963	+		Pf6N2E2_874	0.73	-0.8
1,024,984	+		Pf6N2E2_874	0.76	-0.5
1,024,984	+		Pf6N2E2_874	0.76	-0.7
1,024,985	-		Pf6N2E2_874	0.76	-1.3
1,024,985	-		Pf6N2E2_874	0.76	+0.3
1,025,069	+		Pf6N2E2_874	0.89	+0.3
1,025,096	+				+0.3
1,025,096	+				+0.3
1,025,096	+				+0.3
1,025,096	+				-1.3
1,025,096	+				+0.3
1,025,096	+				+0.3
1,025,097	-				-0.7
1,025,097	-				+0.3
1,025,130	+				+0.3
1,025,322	+		Pf6N2E2_875	0.26	+0.3
1,025,330	+		Pf6N2E2_875	0.28	+0.3
1,025,330	+		Pf6N2E2_875	0.28	+0.3
1,025,331	-		Pf6N2E2_875	0.28	+0.3
1,025,331	-		Pf6N2E2_875	0.28	-0.4
1,025,331	-		Pf6N2E2_875	0.28	-0.7
1,025,331	-		Pf6N2E2_875	0.28	+0.3
1,025,365	-		Pf6N2E2_875	0.36	+0.3
1,025,365	-		Pf6N2E2_875	0.36	-1.0
1,025,432	+		Pf6N2E2_875	0.51	-0.9
1,025,432	+		Pf6N2E2_875	0.51	+0.3
1,025,432	+		Pf6N2E2_875	0.51	-0.7
1,025,432	+		Pf6N2E2_875	0.51	+0.3
1,025,432	+		Pf6N2E2_875	0.51	+0.3
1,025,433	-		Pf6N2E2_875	0.51	+0.3
1,025,433	-		Pf6N2E2_875	0.51	-1.7
1,025,433	-		Pf6N2E2_875	0.51	-0.7
1,025,433	-		Pf6N2E2_875	0.51	-0.4
1,025,433	-		Pf6N2E2_875	0.51	-0.7
1,025,433	-		Pf6N2E2_875	0.51	+0.3
1,025,433	-		Pf6N2E2_875	0.51	+0.3
1,025,433	-		Pf6N2E2_875	0.51	+0.3
1,025,491	+		Pf6N2E2_875	0.65	+0.3
1,025,492	-		Pf6N2E2_875	0.65	+0.3
1,025,621	+				+0.3
1,025,622	-				-0.7
1,025,622	-				+0.3
1,025,622	-				+0.3
1,025,622	-				+0.3
1,025,647	-				+0.3
1,025,660	-				-1.7
1,025,660	-				+0.3
1,025,660	-				+0.3
1,025,670	+				+0.3
1,025,670	+				-1.3
1,025,737	+		Pf6N2E2_876	0.14	-1.3
1,025,761	-		Pf6N2E2_876	0.18	+0.3
1,025,976	+		Pf6N2E2_876	0.51	-2.1
1,026,092	-		Pf6N2E2_876	0.69	-0.4
1,026,095	-		Pf6N2E2_876	0.69	-1.3
1,026,095	-		Pf6N2E2_876	0.69	+0.3
1,026,109	+		Pf6N2E2_876	0.71	-1.3
1,026,110	-		Pf6N2E2_876	0.71	+0.3
1,026,110	-		Pf6N2E2_876	0.71	+1.0
1,026,110	-		Pf6N2E2_876	0.71	+0.3
1,026,269	+				+0.3
1,026,269	+				-0.1
1,026,270	-				+0.3
1,026,277	-				+0.3
1,026,286	-				+0.3
1,026,434	-		Pf6N2E2_877	0.19	-1.6
1,026,472	+		Pf6N2E2_877	0.25	-1.1
1,026,472	+		Pf6N2E2_877	0.25	+0.3
1,026,472	+		Pf6N2E2_877	0.25	+0.3
1,026,472	+		Pf6N2E2_877	0.25	+0.3
1,026,473	-		Pf6N2E2_877	0.25	+0.3
1,026,493	-		Pf6N2E2_877	0.28	-1.3
1,026,493	-		Pf6N2E2_877	0.28	+0.3
1,026,563	+		Pf6N2E2_877	0.39	-1.1
1,026,563	+		Pf6N2E2_877	0.39	-0.8
1,026,737	+		Pf6N2E2_877	0.67	+0.3
1,026,738	-		Pf6N2E2_877	0.67	+0.3
1,026,803	+		Pf6N2E2_877	0.77	-0.7
1,026,803	+		Pf6N2E2_877	0.77	+0.3
1,026,803	+		Pf6N2E2_877	0.77	-0.2
1,026,803	+		Pf6N2E2_877	0.77	-0.6
1,026,803	+		Pf6N2E2_877	0.77	+0.3
1,026,803	+		Pf6N2E2_877	0.77	-0.5
1,026,804	-		Pf6N2E2_877	0.77	-0.2
1,026,804	-		Pf6N2E2_877	0.77	+0.3
1,026,804	-		Pf6N2E2_877	0.77	+0.3
1,026,804	-		Pf6N2E2_877	0.77	+0.3
1,026,804	-		Pf6N2E2_877	0.77	+0.3
1,026,804	-		Pf6N2E2_877	0.77	+0.3
1,026,940	-				+0.3
1,026,953	+				-1.7
1,026,953	+				+0.3
1,026,954	-				+0.3
1,026,971	+				+0.3
1,026,987	+				-0.6
1,026,987	+				+0.3
1,026,988	-				+0.3
1,026,988	-				+0.3
1,026,988	-				-0.8
1,027,026	+				-0.7
1,027,027	-				+0.3
1,027,092	+				-0.7
1,027,171	+				+0.3
1,027,296	+		Pf6N2E2_878	0.18	+0.3
1,027,296	+		Pf6N2E2_878	0.18	+0.3
1,027,296	+		Pf6N2E2_878	0.18	+0.3