Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_70

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
112,159	+				-0.3
112,159	+				-0.7
112,159	+				+0.6
112,159	+				+0.6
112,159	+				+1.0
112,159	+				+0.7
112,159	+				-0.1
112,160	-				+0.5
112,160	-				+0.6
112,282	+				+0.3
112,284	+				-0.9
112,284	+				+0.3
112,284	+				-0.2
112,284	+				+0.2
112,284	+				-0.4
112,284	+				+0.3
112,285	-				-0.7
112,285	-				+0.3
112,285	-				-1.0
112,569	+				-1.3
112,569	+				+0.3
112,569	+				-1.1
112,570	-				-0.6
112,570	-				-1.5
112,571	+				-1.3
112,571	+				-1.3
112,571	+				-0.7
112,571	+				+0.3
112,571	+				-0.7
112,571	+				-0.9
112,571	+				-0.1
112,572	-				+0.3
112,572	-				+1.3
112,572	-				-2.1
112,572	-				-2.3
112,589	-				+0.3
112,589	-				-2.0
112,603	+				-0.7
112,620	+				+0.3
112,620	+				-2.0
112,621	-				-1.3
112,682	+				+0.3
112,683	-				+0.3
112,991	+		Pf6N2E2_70	0.45	+0.3
112,992	-		Pf6N2E2_70	0.45	+0.3
112,992	-		Pf6N2E2_70	0.45	-1.7
113,000	+		Pf6N2E2_70	0.46	-1.3
113,000	+		Pf6N2E2_70	0.46	-2.4
113,001	-		Pf6N2E2_70	0.46	+0.3
113,370	-		Pf6N2E2_70	0.89	+0.3
113,370	-		Pf6N2E2_70	0.89	-2.3
113,376	+		Pf6N2E2_70	0.90	+0.3
113,417	+				-2.3
113,417	+				-1.7
113,624	+		Pf6N2E2_71	0.15	+0.3
113,745	+		Pf6N2E2_71	0.34	-0.4
113,745	+		Pf6N2E2_71	0.34	-0.4
113,825	+		Pf6N2E2_71	0.47	-0.9
113,826	-		Pf6N2E2_71	0.47	-1.4
113,915	+		Pf6N2E2_71	0.61	-0.9
113,915	+		Pf6N2E2_71	0.61	+0.2
113,915	+		Pf6N2E2_71	0.61	-0.7
113,916	-		Pf6N2E2_71	0.61	+0.3
113,916	-		Pf6N2E2_71	0.61	+0.3
114,053	+		Pf6N2E2_71	0.83	+0.3
114,053	+		Pf6N2E2_71	0.83	+0.3
114,196	+				+0.3
114,196	+				+0.3