Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6062

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,880,987	+		Pf6N2E2_6061	0.14	+0.4
6,880,987	+		Pf6N2E2_6061	0.14	-1.6
6,880,988	-		Pf6N2E2_6061	0.14	-2.1
6,880,988	-		Pf6N2E2_6061	0.14	+0.4
6,881,036	+		Pf6N2E2_6061	0.20	-2.0
6,881,037	-		Pf6N2E2_6061	0.20	-2.2
6,881,037	-		Pf6N2E2_6061	0.20	+0.4
6,881,037	-		Pf6N2E2_6061	0.20	-1.5
6,881,200	-		Pf6N2E2_6061	0.38	+0.4
6,881,446	+		Pf6N2E2_6061	0.66	+0.4
6,881,446	+		Pf6N2E2_6061	0.66	-1.6
6,881,446	+		Pf6N2E2_6061	0.66	+0.4
6,881,446	+		Pf6N2E2_6061	0.66	-2.1
6,881,446	+		Pf6N2E2_6061	0.66	+0.4
6,881,446	+		Pf6N2E2_6061	0.66	+0.4
6,881,447	-		Pf6N2E2_6061	0.66	-2.1
6,881,447	-		Pf6N2E2_6061	0.66	-1.6
6,881,447	-		Pf6N2E2_6061	0.66	-2.0
6,881,447	-		Pf6N2E2_6061	0.66	-0.6
6,881,447	-		Pf6N2E2_6061	0.66	-1.6
6,881,447	-		Pf6N2E2_6061	0.66	+0.4
6,881,447	-		Pf6N2E2_6061	0.66	+1.4
6,881,519	-		Pf6N2E2_6061	0.74	-2.2
6,881,611	+		Pf6N2E2_6061	0.85	+0.4
6,881,612	-		Pf6N2E2_6061	0.85	-2.5
6,881,612	-		Pf6N2E2_6061	0.85	+0.4
6,881,695	+				-0.6
6,881,695	+				+0.4
6,881,743	+				+0.4
6,881,743	+				+0.4
6,881,744	-				+0.4
6,881,744	-				-0.6
6,881,744	-				+0.4
6,881,803	+				+0.4
6,881,803	+				+0.4
6,881,886	+				-0.6
6,881,991	+		Pf6N2E2_6062	0.18	+0.4
6,881,992	-		Pf6N2E2_6062	0.18	-1.6
6,882,193	-		Pf6N2E2_6062	0.36	+0.4
6,882,252	-		Pf6N2E2_6062	0.41	+0.4
6,882,389	+		Pf6N2E2_6062	0.53	-1.8
6,882,389	+		Pf6N2E2_6062	0.53	-0.6
6,882,390	-		Pf6N2E2_6062	0.53	-0.6
6,882,390	-		Pf6N2E2_6062	0.53	-0.6
6,882,576	+		Pf6N2E2_6062	0.70	-0.6
6,882,576	+		Pf6N2E2_6062	0.70	-2.8
6,882,576	+		Pf6N2E2_6062	0.70	+0.4
6,882,576	+		Pf6N2E2_6062	0.70	+0.4
6,882,576	+		Pf6N2E2_6062	0.70	-3.4
6,882,577	-		Pf6N2E2_6062	0.70	-1.2
6,882,578	+		Pf6N2E2_6062	0.70	+0.4
6,882,726	+		Pf6N2E2_6062	0.83	+0.4
6,882,727	-		Pf6N2E2_6062	0.83	+0.4
6,882,867	+				+0.4
6,882,868	-				-2.5
6,882,935	-				+0.4
6,882,935	-				-0.6
6,882,935	-				+0.4
6,883,137	+				+0.4
6,883,182	+				-3.6
6,883,183	-				+0.4
6,883,197	+				+0.4