Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5974

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,790,869	-		Pf6N2E2_5972	0.17	-1.0
6,790,869	-		Pf6N2E2_5972	0.17	-0.6
6,790,909	+		Pf6N2E2_5972	0.28	+0.4
6,790,910	-		Pf6N2E2_5972	0.29	+0.4
6,790,910	-		Pf6N2E2_5972	0.29	+0.4
6,791,271	+				-0.6
6,791,271	+				+0.4
6,791,283	+				+0.4
6,791,283	+				-0.6
6,791,283	+				-1.2
6,791,284	-				+0.4
6,791,284	-				+0.4
6,791,284	-				+0.4
6,791,284	-				-1.5
6,791,309	+				+0.4
6,791,310	-				-0.6
6,791,310	-				-0.6
6,791,310	-				-0.1
6,791,312	+				-0.6
6,791,312	+				+0.4
6,791,312	+				+0.4
6,791,313	-				-1.2
6,791,313	-				-0.5
6,791,331	+				-0.6
6,791,332	-				+0.4
6,791,332	-				-0.6
6,791,470	+		Pf6N2E2_5973	0.26	+0.4
6,791,471	-		Pf6N2E2_5973	0.26	+0.4
6,791,558	+		Pf6N2E2_5973	0.44	+0.4
6,791,559	-		Pf6N2E2_5973	0.44	-0.8
6,791,559	-		Pf6N2E2_5973	0.44	+0.4
6,791,559	-		Pf6N2E2_5973	0.44	+0.5
6,791,588	+		Pf6N2E2_5973	0.50	+0.4
6,791,588	+		Pf6N2E2_5973	0.50	+0.4
6,791,589	-		Pf6N2E2_5973	0.51	-0.6
6,791,603	+		Pf6N2E2_5973	0.53	-0.6
6,791,603	+		Pf6N2E2_5973	0.53	-0.3
6,791,603	+		Pf6N2E2_5973	0.53	-1.2
6,791,603	+		Pf6N2E2_5973	0.53	+0.4
6,791,603	+		Pf6N2E2_5973	0.53	-2.5
6,791,603	+		Pf6N2E2_5973	0.53	+0.4
6,791,603	+		Pf6N2E2_5973	0.53	-1.1
6,791,603	+		Pf6N2E2_5973	0.53	-1.4
6,791,603	+		Pf6N2E2_5973	0.53	+0.4
6,791,603	+		Pf6N2E2_5973	0.53	+0.4
6,791,604	-		Pf6N2E2_5973	0.54	+0.4
6,791,604	-		Pf6N2E2_5973	0.54	+0.4
6,791,604	-		Pf6N2E2_5973	0.54	-0.7
6,791,604	-		Pf6N2E2_5973	0.54	-0.7
6,791,604	-		Pf6N2E2_5973	0.54	-0.6
6,791,604	-		Pf6N2E2_5973	0.54	-0.6
6,791,604	-		Pf6N2E2_5973	0.54	-0.6
6,791,604	-		Pf6N2E2_5973	0.54	-0.6
6,791,738	+		Pf6N2E2_5973	0.81	-1.2
6,791,739	-		Pf6N2E2_5973	0.82	+0.4
6,791,855	+				-0.4
6,791,856	-				+0.4
6,791,895	-				-1.2
6,791,895	-				+0.4
6,792,002	+		Pf6N2E2_5974	0.27	-0.6
6,792,003	-		Pf6N2E2_5974	0.27	-1.2
6,792,003	-		Pf6N2E2_5974	0.27	+0.4
6,792,109	+		Pf6N2E2_5974	0.44	+0.4
6,792,110	-		Pf6N2E2_5974	0.44	-0.6
6,792,243	-		Pf6N2E2_5974	0.65	-0.6
6,792,377	+		Pf6N2E2_5974	0.86	+0.4
6,792,477	+				+0.4
6,792,477	+				-0.7
6,792,504	+				-0.6
6,792,505	-				-2.0
6,792,505	-				+0.4
6,792,505	-				-2.1
6,792,505	-				-1.2
6,792,505	-				+0.4
6,792,505	-				-0.6
6,792,561	-				+0.4
6,792,578	-				-0.6
6,792,607	+				-0.6
6,792,608	-				-0.6
6,792,608	-				+1.4
6,792,608	-				+0.4
6,792,608	-				-1.5
6,792,609	+				-1.2
6,792,609	+				+1.4
6,792,610	-				-0.6
6,792,610	-				-0.6
6,792,705	-				-0.6
6,792,927	-		Pf6N2E2_5975	0.28	+0.4
6,792,969	+		Pf6N2E2_5975	0.32	-0.6
6,792,969	+		Pf6N2E2_5975	0.32	-2.0
6,792,970	-		Pf6N2E2_5975	0.32	+0.4
6,793,249	+		Pf6N2E2_5975	0.61	+0.4
6,793,249	+		Pf6N2E2_5975	0.61	+0.4
6,793,250	-		Pf6N2E2_5975	0.61	+0.4
6,793,250	-		Pf6N2E2_5975	0.61	-0.6
6,793,391	+		Pf6N2E2_5975	0.75	-0.6