Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5869

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,687,977	+		Pf6N2E2_5868	0.23	+0.4
6,687,978	-		Pf6N2E2_5868	0.24	+0.6
6,688,002	-		Pf6N2E2_5868	0.26	-0.6
6,688,007	+		Pf6N2E2_5868	0.26	+0.4
6,688,008	-		Pf6N2E2_5868	0.27	-0.6
6,688,184	-		Pf6N2E2_5868	0.44	-0.3
6,688,259	+		Pf6N2E2_5868	0.51	-1.0
6,688,259	+		Pf6N2E2_5868	0.51	+0.4
6,688,260	-		Pf6N2E2_5868	0.51	+0.4
6,688,260	-		Pf6N2E2_5868	0.51	-0.6
6,688,260	-		Pf6N2E2_5868	0.51	+0.2
6,688,493	+		Pf6N2E2_5868	0.74	+1.4
6,688,493	+		Pf6N2E2_5868	0.74	+0.4
6,688,494	-		Pf6N2E2_5868	0.75	-0.1
6,688,494	-		Pf6N2E2_5868	0.75	-0.6
6,688,497	+		Pf6N2E2_5868	0.75	-0.7
6,688,497	+		Pf6N2E2_5868	0.75	-0.6
6,688,497	+		Pf6N2E2_5868	0.75	-0.6
6,688,497	+		Pf6N2E2_5868	0.75	+0.4
6,688,497	+		Pf6N2E2_5868	0.75	-0.6
6,688,497	+		Pf6N2E2_5868	0.75	-0.5
6,688,497	+		Pf6N2E2_5868	0.75	-1.2
6,688,497	+		Pf6N2E2_5868	0.75	-1.2
6,688,497	+		Pf6N2E2_5868	0.75	+0.4
6,688,497	+		Pf6N2E2_5868	0.75	-0.6
6,688,497	+		Pf6N2E2_5868	0.75	-0.6
6,688,497	+		Pf6N2E2_5868	0.75	+0.4
6,688,497	+		Pf6N2E2_5868	0.75	-0.6
6,688,498	-		Pf6N2E2_5868	0.75	-0.4
6,688,498	-		Pf6N2E2_5868	0.75	+0.4
6,688,498	-		Pf6N2E2_5868	0.75	+0.4
6,688,498	-		Pf6N2E2_5868	0.75	+0.4
6,688,498	-		Pf6N2E2_5868	0.75	-0.6
6,688,498	-		Pf6N2E2_5868	0.75	+0.4
6,688,575	+		Pf6N2E2_5868	0.83	+0.4
6,688,576	-		Pf6N2E2_5868	0.83	+0.4
6,688,617	+		Pf6N2E2_5868	0.87	-0.3
6,688,618	-		Pf6N2E2_5868	0.87	-0.5
6,688,618	-		Pf6N2E2_5868	0.87	+0.4
6,688,748	+				-1.2
6,688,748	+				-1.2
6,688,748	+				+0.4
6,688,789	+				+0.4
6,688,901	+				+0.4
6,688,934	+				-1.2
6,688,935	-				+0.4
6,688,935	-				+0.4
6,688,935	-				+0.4
6,688,935	-				-1.6
6,688,935	-				+0.4
6,689,199	+		Pf6N2E2_5869	0.57	+0.4
6,689,199	+		Pf6N2E2_5869	0.57	-0.6
6,689,200	-		Pf6N2E2_5869	0.57	-0.6
6,689,200	-		Pf6N2E2_5869	0.57	-0.6
6,689,200	-		Pf6N2E2_5869	0.57	+0.4
6,689,421	+				-1.6
6,689,490	+				+0.4
6,689,490	+				-0.3
6,689,490	+				-1.0
6,689,491	-				-1.9
6,689,491	-				-1.0
6,689,491	-				-0.6
6,689,491	-				+0.4
6,689,491	-				-0.9