Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5801

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,617,653	+		Pf6N2E2_5800	0.19	+0.4
6,617,653	+		Pf6N2E2_5800	0.19	-0.8
6,617,653	+		Pf6N2E2_5800	0.19	+0.4
6,617,653	+		Pf6N2E2_5800	0.19	+0.4
6,617,654	-		Pf6N2E2_5800	0.19	-1.2
6,617,654	-		Pf6N2E2_5800	0.19	-0.8
6,617,654	-		Pf6N2E2_5800	0.19	-0.7
6,617,654	-		Pf6N2E2_5800	0.19	+0.4
6,617,654	-		Pf6N2E2_5800	0.19	+0.6
6,617,654	-		Pf6N2E2_5800	0.19	-0.6
6,617,689	+		Pf6N2E2_5800	0.24	-1.4
6,617,690	-		Pf6N2E2_5800	0.24	+0.4
6,617,690	-		Pf6N2E2_5800	0.24	-0.6
6,617,690	-		Pf6N2E2_5800	0.24	-1.2
6,617,690	-		Pf6N2E2_5800	0.24	+0.4
6,617,690	-		Pf6N2E2_5800	0.24	-1.6
6,617,690	-		Pf6N2E2_5800	0.24	+0.4
6,617,690	-		Pf6N2E2_5800	0.24	+0.4
6,617,776	+		Pf6N2E2_5800	0.35	+0.4
6,617,776	+		Pf6N2E2_5800	0.35	-1.4
6,617,777	-		Pf6N2E2_5800	0.35	+0.4
6,617,777	-		Pf6N2E2_5800	0.35	-0.1
6,617,777	-		Pf6N2E2_5800	0.35	-0.8
6,617,777	-		Pf6N2E2_5800	0.35	+0.4
6,617,777	-		Pf6N2E2_5800	0.35	+0.4
6,617,777	-		Pf6N2E2_5800	0.35	-0.6
6,617,861	-		Pf6N2E2_5800	0.46	-1.2
6,617,905	+		Pf6N2E2_5800	0.51	-0.6
6,617,906	-		Pf6N2E2_5800	0.51	+0.4
6,617,935	+		Pf6N2E2_5800	0.55	-1.6
6,617,935	+		Pf6N2E2_5800	0.55	-0.2
6,617,936	-		Pf6N2E2_5800	0.55	+0.4
6,617,936	-		Pf6N2E2_5800	0.55	+0.4
6,617,936	-		Pf6N2E2_5800	0.55	+0.4
6,618,028	+		Pf6N2E2_5800	0.67	-0.6
6,618,029	-		Pf6N2E2_5800	0.67	+0.4
6,618,029	-		Pf6N2E2_5800	0.67	-0.4
6,618,029	-		Pf6N2E2_5800	0.67	-1.2
6,618,031	+		Pf6N2E2_5800	0.67	+1.4
6,618,031	+		Pf6N2E2_5800	0.67	-0.2
6,618,031	+		Pf6N2E2_5800	0.67	+0.4
6,618,031	+		Pf6N2E2_5800	0.67	-1.8
6,618,032	-		Pf6N2E2_5800	0.67	+0.4
6,618,032	-		Pf6N2E2_5800	0.67	+0.4
6,618,032	-		Pf6N2E2_5800	0.67	+0.4
6,618,070	+		Pf6N2E2_5800	0.72	+0.2
6,618,071	-		Pf6N2E2_5800	0.72	+0.4
6,618,106	+		Pf6N2E2_5800	0.77	+0.4
6,618,185	-		Pf6N2E2_5800	0.87	+0.4
6,618,185	-		Pf6N2E2_5800	0.87	-0.6
6,618,195	-		Pf6N2E2_5800	0.88	+0.4
6,618,261	+				-0.5
6,618,261	+				+0.4
6,618,278	+				-0.6
6,618,278	+				+0.4
6,618,278	+				+0.4
6,618,278	+				-1.2
6,618,278	+				+0.4
6,618,279	-				+0.4
6,618,306	+				-0.6
6,618,361	+				+0.4
6,618,368	-				+0.4
6,618,368	-				+0.4
6,618,413	-				+0.4
6,618,454	-				+0.4
6,618,767	-				-0.1
6,619,017	+		Pf6N2E2_5801	0.28	-1.6
6,619,083	+		Pf6N2E2_5801	0.33	+0.4
6,619,083	+		Pf6N2E2_5801	0.33	-1.0
6,619,084	-		Pf6N2E2_5801	0.33	+0.4
6,619,084	-		Pf6N2E2_5801	0.33	+0.4
6,619,084	-		Pf6N2E2_5801	0.33	-0.3
6,619,084	-		Pf6N2E2_5801	0.33	-0.8
6,619,084	-		Pf6N2E2_5801	0.33	-0.2
6,619,161	+		Pf6N2E2_5801	0.39	-0.7
6,619,161	+		Pf6N2E2_5801	0.39	+0.4
6,619,162	-		Pf6N2E2_5801	0.40	-0.6
6,619,162	-		Pf6N2E2_5801	0.40	+0.4
6,619,162	-		Pf6N2E2_5801	0.40	-0.6
6,619,162	-		Pf6N2E2_5801	0.40	+0.4
6,619,162	-		Pf6N2E2_5801	0.40	-0.6
6,619,216	-		Pf6N2E2_5801	0.44	-0.2
6,619,216	-		Pf6N2E2_5801	0.44	+0.2
6,619,216	-		Pf6N2E2_5801	0.44	-0.6
6,619,227	+		Pf6N2E2_5801	0.45	+0.4
6,619,227	+		Pf6N2E2_5801	0.45	-0.8
6,619,227	+		Pf6N2E2_5801	0.45	-0.1
6,619,227	+		Pf6N2E2_5801	0.45	-1.6
6,619,228	-		Pf6N2E2_5801	0.45	-0.4
6,619,282	-		Pf6N2E2_5801	0.49	-1.2
6,619,282	-		Pf6N2E2_5801	0.49	-1.6
6,619,282	-		Pf6N2E2_5801	0.49	-0.6
6,619,282	-		Pf6N2E2_5801	0.49	+0.4
6,619,282	-		Pf6N2E2_5801	0.49	+0.4
6,619,282	-		Pf6N2E2_5801	0.49	-0.6
6,619,304	+		Pf6N2E2_5801	0.50	-0.6
6,619,440	+		Pf6N2E2_5801	0.61	+0.4
6,619,440	+		Pf6N2E2_5801	0.61	+0.4
6,619,441	-		Pf6N2E2_5801	0.61	-0.6
6,619,441	-		Pf6N2E2_5801	0.61	+0.4
6,619,561	-		Pf6N2E2_5801	0.70	+0.4
6,619,644	+		Pf6N2E2_5801	0.77	-0.6
6,619,644	+		Pf6N2E2_5801	0.77	-1.2
6,619,644	+		Pf6N2E2_5801	0.77	+0.4
6,619,645	-		Pf6N2E2_5801	0.77	-0.6
6,619,645	-		Pf6N2E2_5801	0.77	-0.6
6,619,645	-		Pf6N2E2_5801	0.77	+0.4
6,619,647	-		Pf6N2E2_5801	0.77	+0.4
6,619,707	+		Pf6N2E2_5801	0.82	-0.6
6,619,708	-		Pf6N2E2_5801	0.82	-0.6
6,619,779	+		Pf6N2E2_5801	0.87	-0.6
6,619,780	-		Pf6N2E2_5801	0.87	-0.6
6,619,780	-		Pf6N2E2_5801	0.87	-0.6
6,619,780	-		Pf6N2E2_5801	0.87	+0.4
6,619,870	-				+0.4
6,619,906	+				+0.4
6,619,906	+				-0.6
6,619,907	-				-1.6
6,619,907	-				+0.4
6,619,907	-				-0.6
6,619,907	-				+0.4
6,619,907	-				+0.4
6,619,907	-				+0.4
6,619,907	-				-0.6
6,619,907	-				-0.6
6,619,907	-				+0.4
6,619,907	-				-0.6
6,619,919	+				-0.2
6,619,920	-				+0.4
6,619,920	-				-0.6
6,619,945	+				-1.1
6,619,945	+				+0.4
6,619,945	+				+0.4
6,619,945	+				+0.4
6,619,945	+				-0.2
6,619,945	+				-1.2
6,619,946	-				-1.2
6,619,946	-				+0.4
6,619,946	-				+0.4
6,619,946	-				+0.4
6,619,946	-				-0.6
6,619,964	+				+0.4
6,619,964	+				+1.4
6,619,965	-				-0.1
6,620,011	+				-0.4
6,620,012	-				-1.2
6,620,012	-				-1.6
6,620,034	+				+0.4
6,620,035	-				-0.6
6,620,069	+		Pf6N2E2_5802	0.12	+0.4
6,620,069	+		Pf6N2E2_5802	0.12	+0.4
6,620,069	+		Pf6N2E2_5802	0.12	+0.4
6,620,069	+		Pf6N2E2_5802	0.12	+0.4
6,620,069	+		Pf6N2E2_5802	0.12	-0.6
6,620,069	+		Pf6N2E2_5802	0.12	-0.6
6,620,155	+		Pf6N2E2_5802	0.29	-0.6
6,620,155	+		Pf6N2E2_5802	0.29	-1.5
6,620,156	-				+0.4
6,620,159	+		Pf6N2E2_5802	0.30	+0.4
6,620,159	+		Pf6N2E2_5802	0.30	-1.2
6,620,160	-		Pf6N2E2_5802	0.30	-0.6
6,620,160	-		Pf6N2E2_5802	0.30	-0.2
6,620,160	-		Pf6N2E2_5802	0.30	+0.4
6,620,160	-		Pf6N2E2_5802	0.30	+1.9
6,620,205	+		Pf6N2E2_5802	0.39	+0.4
6,620,205	+		Pf6N2E2_5802	0.39	+0.4
6,620,205	+		Pf6N2E2_5802	0.39	-1.3
6,620,206	-		Pf6N2E2_5802	0.39	-0.4
6,620,663	-				+0.4
6,620,663	-				-0.6
6,620,663	-				-0.1
6,620,896	+		Pf6N2E2_5803	0.24	-0.2
6,620,897	-		Pf6N2E2_5803	0.24	-0.8