Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5553

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,368,061	+		Pf6N2E2_5552	0.72	+0.4
6,368,061	+		Pf6N2E2_5552	0.72	-0.4
6,368,061	+		Pf6N2E2_5552	0.72	+0.4
6,368,061	+		Pf6N2E2_5552	0.72	+0.4
6,368,061	+		Pf6N2E2_5552	0.72	-1.6
6,368,062	-		Pf6N2E2_5552	0.72	-0.4
6,368,062	-		Pf6N2E2_5552	0.72	+0.4
6,368,062	-		Pf6N2E2_5552	0.72	+0.4
6,368,062	-		Pf6N2E2_5552	0.72	+0.4
6,368,062	-		Pf6N2E2_5552	0.72	+0.4
6,368,062	-		Pf6N2E2_5552	0.72	+0.0
6,368,062	-		Pf6N2E2_5552	0.72	-0.2
6,368,062	-		Pf6N2E2_5552	0.72	-0.6
6,368,062	-		Pf6N2E2_5552	0.72	-0.6
6,368,158	-		Pf6N2E2_5552	0.77	+0.4
6,368,158	-		Pf6N2E2_5552	0.77	+0.4
6,368,163	+		Pf6N2E2_5552	0.77	-1.6
6,368,163	+		Pf6N2E2_5552	0.77	+0.4
6,368,163	+		Pf6N2E2_5552	0.77	+0.4
6,368,163	+		Pf6N2E2_5552	0.77	+0.4
6,368,163	+		Pf6N2E2_5552	0.77	-1.2
6,368,164	-		Pf6N2E2_5552	0.77	-0.6
6,368,164	-		Pf6N2E2_5552	0.77	-0.6
6,368,164	-		Pf6N2E2_5552	0.77	-1.6
6,368,164	-		Pf6N2E2_5552	0.77	+0.4
6,368,164	-		Pf6N2E2_5552	0.77	+0.4
6,368,193	+		Pf6N2E2_5552	0.79	-0.6
6,368,194	-		Pf6N2E2_5552	0.79	-0.6
6,368,194	-		Pf6N2E2_5552	0.79	+0.4
6,368,194	-		Pf6N2E2_5552	0.79	+0.0
6,368,199	+		Pf6N2E2_5552	0.79	-1.2
6,368,199	+		Pf6N2E2_5552	0.79	+0.4
6,368,199	+		Pf6N2E2_5552	0.79	-0.8
6,368,199	+		Pf6N2E2_5552	0.79	+0.1
6,368,199	+		Pf6N2E2_5552	0.79	+0.4
6,368,199	+		Pf6N2E2_5552	0.79	-0.7
6,368,199	+		Pf6N2E2_5552	0.79	+0.4
6,368,199	+		Pf6N2E2_5552	0.79	+0.4
6,368,199	+		Pf6N2E2_5552	0.79	-0.6
6,368,199	+		Pf6N2E2_5552	0.79	-0.6
6,368,199	+		Pf6N2E2_5552	0.79	-1.2
6,368,200	-		Pf6N2E2_5552	0.79	+0.2
6,368,200	-		Pf6N2E2_5552	0.79	+0.4
6,368,200	-		Pf6N2E2_5552	0.79	-0.6
6,368,200	-		Pf6N2E2_5552	0.79	-1.6
6,368,200	-		Pf6N2E2_5552	0.79	+0.4
6,368,200	-		Pf6N2E2_5552	0.79	-0.7
6,368,200	-		Pf6N2E2_5552	0.79	+0.4
6,368,200	-		Pf6N2E2_5552	0.79	+0.4
6,368,200	-		Pf6N2E2_5552	0.79	-0.6
6,368,200	-		Pf6N2E2_5552	0.79	-0.4
6,368,200	-		Pf6N2E2_5552	0.79	+0.4
6,368,200	-		Pf6N2E2_5552	0.79	-1.4
6,368,200	-		Pf6N2E2_5552	0.79	-0.3
6,368,200	-		Pf6N2E2_5552	0.79	+0.4
6,368,200	-		Pf6N2E2_5552	0.79	+1.4
6,368,389	+		Pf6N2E2_5552	0.90	-1.2
6,368,546	+				+0.4
6,368,654	+				+0.4
6,368,654	+				-0.6
6,368,654	+				-0.6
6,368,654	+				-1.2
6,368,654	+				-0.6
6,368,654	+				-0.6
6,368,655	-				-0.6
6,368,655	-				-0.6
6,368,675	+				+0.4
6,368,675	+				+0.4
6,368,676	-				-1.0
6,368,676	-				+0.4
6,368,676	-				-0.9
6,368,676	-				+0.4
6,368,783	+				-1.6
6,368,924	-				-1.2
6,368,924	-				-0.4
6,369,011	+				-1.6
6,369,011	+				+0.4
6,369,011	+				-1.2
6,369,011	+				-0.6
6,369,011	+				+0.4
6,369,012	-				+0.4
6,369,012	-				-3.3
6,369,012	-				+0.4
6,369,012	-				-0.6
6,369,012	-				+0.4
6,369,012	-				+0.4
6,369,013	+				+0.4
6,369,013	+				+0.4
6,369,014	-				+0.4
6,369,203	-		Pf6N2E2_5553	0.14	+0.4
6,369,472	+		Pf6N2E2_5553	0.39	-2.7
6,369,472	+		Pf6N2E2_5553	0.39	+0.4
6,369,472	+		Pf6N2E2_5553	0.39	-2.7
6,369,472	+		Pf6N2E2_5553	0.39	+0.4
6,369,473	-		Pf6N2E2_5553	0.39	+0.4
6,369,473	-		Pf6N2E2_5553	0.39	+0.4
6,369,473	-		Pf6N2E2_5553	0.39	+0.4
6,369,473	-		Pf6N2E2_5553	0.39	+0.4
6,369,473	-		Pf6N2E2_5553	0.39	+0.4
6,369,607	+		Pf6N2E2_5553	0.52	-3.2
6,369,607	+		Pf6N2E2_5553	0.52	-1.2
6,369,607	+		Pf6N2E2_5553	0.52	-0.6
6,369,608	-		Pf6N2E2_5553	0.52	-0.2
6,369,608	-		Pf6N2E2_5553	0.52	-0.6
6,369,608	-		Pf6N2E2_5553	0.52	+0.4
6,369,608	-		Pf6N2E2_5553	0.52	-1.2
6,369,608	-		Pf6N2E2_5553	0.52	-0.6
6,369,657	+		Pf6N2E2_5553	0.57	+0.4
6,369,966	+		Pf6N2E2_5553	0.86	-0.6
6,370,152	+				+0.4
6,370,152	+				-0.5
6,370,153	-				+0.4
6,370,153	-				-0.9
6,370,153	-				+1.4
6,370,154	+				-0.9
6,370,154	+				-0.7
6,370,155	-				+0.4
6,370,155	-				-0.2
6,370,155	-				-1.9
6,370,155	-				+0.4
6,370,155	-				+0.8
6,370,189	+				+0.4
6,370,189	+				-0.4
6,370,189	+				+0.4
6,370,190	-				+0.4
6,370,260	+				+0.4
6,370,271	-				-0.6
6,370,288	+				-1.2
6,370,289	-				-0.6
6,370,289	-				-1.1
6,370,289	-				-0.6
6,370,391	+				-0.6
6,370,392	-				-0.6
6,370,437	+		Pf6N2E2_5554	0.18	+0.4
6,370,437	+		Pf6N2E2_5554	0.18	-0.8
6,370,438	-		Pf6N2E2_5554	0.18	+0.1
6,370,532	-		Pf6N2E2_5554	0.38	+0.2
6,370,712	+		Pf6N2E2_5554	0.74	-0.6
6,370,712	+		Pf6N2E2_5554	0.74	-0.7
6,370,712	+		Pf6N2E2_5554	0.74	-1.9
6,370,726	-		Pf6N2E2_5554	0.77	-0.9
6,370,760	+		Pf6N2E2_5554	0.84	-1.2
6,370,761	-		Pf6N2E2_5554	0.84	-0.6
6,370,874	+				-2.4
6,370,874	+				+0.4
6,370,874	+				+0.4
6,370,883	-				-0.6
6,370,898	-				-0.6
6,370,898	-				+0.4
6,370,915	+				+0.4
6,370,932	-				-1.6
6,370,942	+				-0.6
6,370,943	-				-1.9
6,371,083	-		Pf6N2E2_5555	0.72	+0.4
6,371,083	-		Pf6N2E2_5555	0.72	-0.6