Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5455

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,260,868	+		Pf6N2E2_5453	0.76	-0.5
6,260,868	+		Pf6N2E2_5453	0.76	-0.6
6,260,869	-		Pf6N2E2_5453	0.77	-0.6
6,261,037	+				-1.9
6,261,038	-				+0.4
6,261,038	-				-1.2
6,261,060	-				+0.4
6,261,060	-				+0.4
6,261,170	-				+0.4
6,261,179	-				+0.8
6,261,182	+				-0.6
6,261,182	+				-1.6
6,261,182	+				+0.4
6,261,182	+				+0.4
6,261,182	+				+0.4
6,261,182	+				+0.4
6,261,182	+				+0.4
6,261,183	-				+0.4
6,261,183	-				-0.3
6,261,183	-				+0.4
6,261,183	-				-1.3
6,261,183	-				+0.3
6,261,183	-				+0.4
6,261,183	-				+0.4
6,261,183	-				-0.4
6,261,183	-				-0.5
6,261,183	-				-0.9
6,261,336	-				+0.4
6,261,336	-				-0.2
6,261,347	+				-0.6
6,261,348	-				-0.9
6,261,434	+				+0.4
6,261,434	+				+0.1
6,261,435	-				-0.6
6,261,458	+				-0.2
6,261,458	+				-0.6
6,261,459	-				+0.4
6,261,459	-				-0.6
6,261,459	-				-0.8
6,261,485	+				+0.4
6,261,486	-				+1.2
6,261,491	+				+0.4
6,261,503	+				+0.4
6,261,503	+				-0.6
6,261,503	+				+0.4
6,261,503	+				-0.6
6,261,503	+				+0.4
6,261,577	+				+0.8
6,261,578	-				+0.1
6,261,578	-				-0.6
6,261,578	-				-1.3
6,261,578	-				+0.4
6,261,578	-				-0.6
6,261,578	-				+0.4
6,261,578	-				-1.2
6,261,578	-				+0.4
6,261,599	+				-1.9
6,261,599	+				+0.4
6,261,599	+				-0.6
6,261,599	+				+0.4
6,261,599	+				+0.4
6,261,599	+				-0.6
6,261,600	-				-0.8
6,261,602	+				-0.6
6,261,603	-				+0.4
6,261,603	-				-2.4
6,261,603	-				+0.4
6,261,650	+				-0.6
6,261,650	+				-0.6
6,261,651	-				-0.6
6,261,651	-				-0.6
6,261,651	-				-1.2
6,261,651	-				-1.2
6,261,651	-				-1.2
6,261,709	+				-0.4
6,261,709	+				+0.4
6,261,709	+				-0.6
6,261,709	+				+0.4
6,261,709	+				-0.9
6,261,709	+				+0.4
6,261,709	+				+0.4
6,261,709	+				+0.4
6,261,709	+				+0.4
6,261,709	+				-1.4
6,261,710	-				+0.4
6,261,718	-				-0.6
6,261,718	-				+0.4
6,261,732	+				+0.4
6,261,733	-				-0.6
6,261,733	-				+0.4
6,261,773	+				+0.4
6,261,786	+				+0.4
6,261,786	+				+1.7
6,261,786	+				+0.4
6,261,787	-				+0.4
6,261,787	-				-1.6
6,261,787	-				-2.2
6,261,787	-				+0.0
6,261,787	-				-1.3
6,261,790	+				+0.4
6,261,790	+				-0.6
6,261,790	+				-1.2
6,261,791	-				-0.6
6,261,807	+				+0.4
6,261,808	-				-1.2
6,261,808	-				-0.6
6,261,814	-				+0.4
6,261,814	-				+0.4
6,261,829	-				+0.4
6,261,835	+				+0.4
6,261,835	+				-0.6
6,261,836	-				+0.4
6,261,836	-				+0.4
6,261,891	+				-0.6
6,261,891	+				-1.6
6,261,892	-				+0.4
6,261,892	-				+0.1
6,261,892	-				+0.4
6,261,892	-				-0.7
6,261,892	-				-0.6
6,262,330	-		Pf6N2E2_5455	0.79	-0.6
6,262,330	-		Pf6N2E2_5455	0.79	-0.6
6,262,330	-		Pf6N2E2_5455	0.79	-0.6
6,262,498	+				-1.2
6,262,520	+				-0.6
6,262,520	+				-0.6
6,262,521	-				+0.4
6,262,521	-				-0.6
6,262,632	+				-0.6
6,262,632	+				-0.2
6,262,632	+				-0.6
6,262,645	+				+0.4
6,262,645	+				-1.6
6,262,646	-				+0.4
6,262,646	-				+0.4
6,262,646	-				-1.2
6,262,646	-				-0.3
6,262,646	-				-0.9
6,262,646	-				+0.4
6,262,646	-				-0.4
6,262,646	-				+0.4
6,262,646	-				-0.7
6,262,789	+				-0.6
6,262,810	+				+0.4
6,262,811	-				+0.4
6,262,829	+				+0.4
6,262,867	+				-1.2
6,262,868	-				-0.6
6,263,066	-		Pf6N2E2_5456	0.19	+0.4
6,263,121	+		Pf6N2E2_5456	0.24	-0.7
6,263,141	+		Pf6N2E2_5456	0.26	+0.4
6,263,141	+		Pf6N2E2_5456	0.26	-0.3
6,263,141	+		Pf6N2E2_5456	0.26	-1.2
6,263,141	+		Pf6N2E2_5456	0.26	+0.4
6,263,141	+		Pf6N2E2_5456	0.26	+0.0
6,263,142	-		Pf6N2E2_5456	0.26	+0.4
6,263,142	-		Pf6N2E2_5456	0.26	-1.2
6,263,142	-		Pf6N2E2_5456	0.26	-0.9
6,263,142	-		Pf6N2E2_5456	0.26	-0.6
6,263,180	+		Pf6N2E2_5456	0.30	-0.6
6,263,180	+		Pf6N2E2_5456	0.30	+0.4
6,263,181	-		Pf6N2E2_5456	0.30	-0.6
6,263,181	-		Pf6N2E2_5456	0.30	-0.9
6,263,181	-		Pf6N2E2_5456	0.30	-0.6
6,263,181	-		Pf6N2E2_5456	0.30	-0.3
6,263,181	-		Pf6N2E2_5456	0.30	-0.8
6,263,195	+		Pf6N2E2_5456	0.31	-1.6
6,263,233	+		Pf6N2E2_5456	0.35	-0.6
6,263,234	-		Pf6N2E2_5456	0.35	-1.0
6,263,237	-		Pf6N2E2_5456	0.35	-0.6
6,263,237	-		Pf6N2E2_5456	0.35	-0.4
6,263,237	-		Pf6N2E2_5456	0.35	-1.0
6,263,249	+		Pf6N2E2_5456	0.36	-0.6
6,263,250	-		Pf6N2E2_5456	0.36	-0.9
6,263,266	+		Pf6N2E2_5456	0.38	-1.6
6,263,267	-		Pf6N2E2_5456	0.38	-1.0
6,263,270	+		Pf6N2E2_5456	0.38	+0.4
6,263,271	-		Pf6N2E2_5456	0.38	-1.2
6,263,271	-		Pf6N2E2_5456	0.38	+0.4
6,263,271	-		Pf6N2E2_5456	0.38	+0.4
6,263,277	-		Pf6N2E2_5456	0.39	+0.4
6,263,320	+		Pf6N2E2_5456	0.43	+0.4
6,263,320	+		Pf6N2E2_5456	0.43	+0.4
6,263,320	+		Pf6N2E2_5456	0.43	-0.6
6,263,320	+		Pf6N2E2_5456	0.43	+0.4
6,263,320	+		Pf6N2E2_5456	0.43	+0.4
6,263,320	+		Pf6N2E2_5456	0.43	+0.6
6,263,321	-		Pf6N2E2_5456	0.43	+0.4
6,263,321	-		Pf6N2E2_5456	0.43	+0.4
6,263,321	-		Pf6N2E2_5456	0.43	+0.4
6,263,337	-		Pf6N2E2_5456	0.45	+0.4
6,263,355	-		Pf6N2E2_5456	0.46	+0.4
6,263,355	-		Pf6N2E2_5456	0.46	+1.2
6,263,355	-		Pf6N2E2_5456	0.46	+0.4
6,263,355	-		Pf6N2E2_5456	0.46	-0.6
6,263,355	-		Pf6N2E2_5456	0.46	+0.4
6,263,356	+		Pf6N2E2_5456	0.46	+0.4
6,263,357	-		Pf6N2E2_5456	0.47	+0.4