Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5412

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,214,713	+				-0.6
6,214,713	+				+0.4
6,214,714	-				+0.4
6,214,714	-				+0.4
6,214,749	+				+0.4
6,214,812	+				+0.4
6,214,813	-				-0.8
6,214,857	+		Pf6N2E2_5410	0.17	-0.6
6,214,857	+		Pf6N2E2_5410	0.17	-1.2
6,214,857	+		Pf6N2E2_5410	0.17	-0.6
6,214,857	+		Pf6N2E2_5410	0.17	+0.4
6,214,857	+		Pf6N2E2_5410	0.17	+0.4
6,215,022	+		Pf6N2E2_5410	0.52	+0.4
6,215,022	+		Pf6N2E2_5410	0.52	-0.9
6,215,022	+		Pf6N2E2_5410	0.52	-0.6
6,215,022	+		Pf6N2E2_5410	0.52	+0.4
6,215,022	+		Pf6N2E2_5410	0.52	-0.1
6,215,022	+		Pf6N2E2_5410	0.52	+0.4
6,215,022	+		Pf6N2E2_5410	0.52	+0.0
6,215,023	-		Pf6N2E2_5410	0.52	+0.4
6,215,023	-		Pf6N2E2_5410	0.52	+0.4
6,215,023	-		Pf6N2E2_5410	0.52	+0.4
6,215,023	-		Pf6N2E2_5410	0.52	+0.4
6,215,060	+		Pf6N2E2_5410	0.60	+0.4
6,215,061	-		Pf6N2E2_5410	0.61	-0.6
6,215,185	+		Pf6N2E2_5410	0.87	+1.4
6,215,185	+		Pf6N2E2_5410	0.87	-0.6
6,215,185	+		Pf6N2E2_5410	0.87	-0.4
6,215,186	-		Pf6N2E2_5410	0.87	+0.4
6,215,186	-		Pf6N2E2_5410	0.87	-1.2
6,215,190	-		Pf6N2E2_5410	0.88	+0.4
6,215,190	-		Pf6N2E2_5410	0.88	+0.4
6,215,190	-		Pf6N2E2_5410	0.88	-0.6
6,215,247	+				-0.6
6,215,285	+				+0.4
6,215,285	+				-1.2
6,215,285	+				+0.4
6,215,285	+				+0.4
6,215,285	+				+0.4
6,215,286	-				+0.4
6,215,286	-				-0.5
6,215,286	-				+0.4
6,215,286	-				-1.2
6,215,359	+		Pf6N2E2_5411	0.22	+0.8
6,215,389	+		Pf6N2E2_5411	0.31	+0.4
6,215,390	-		Pf6N2E2_5411	0.32	-0.2
6,215,488	+		Pf6N2E2_5411	0.62	+0.4
6,215,488	+		Pf6N2E2_5411	0.62	-1.9
6,215,489	-		Pf6N2E2_5411	0.62	+0.4
6,215,489	-		Pf6N2E2_5411	0.62	+0.4
6,215,612	-				+0.4
6,215,612	-				-0.6
6,215,653	+				+0.2
6,215,654	-				+0.4
6,215,661	-				-0.6
6,215,714	+				-0.4
6,215,719	+				-1.9
6,215,719	+				+0.4
6,215,720	-				+0.4
6,215,720	-				+0.4
6,215,872	+		Pf6N2E2_5412	0.19	-0.6
6,215,876	+		Pf6N2E2_5412	0.20	+0.4
6,215,876	+		Pf6N2E2_5412	0.20	+0.4
6,215,876	+		Pf6N2E2_5412	0.20	-0.6
6,215,876	+		Pf6N2E2_5412	0.20	+0.2
6,215,877	-		Pf6N2E2_5412	0.20	-0.2
6,215,877	-		Pf6N2E2_5412	0.20	+0.4
6,215,877	-		Pf6N2E2_5412	0.20	+0.4
6,215,877	-		Pf6N2E2_5412	0.20	-0.6
6,216,274	+		Pf6N2E2_5412	0.62	-1.2
6,216,274	+		Pf6N2E2_5412	0.62	-0.5
6,216,305	+		Pf6N2E2_5412	0.66	-0.6
6,216,471	+		Pf6N2E2_5412	0.83	-1.6
6,216,471	+		Pf6N2E2_5412	0.83	-1.2
6,216,471	+		Pf6N2E2_5412	0.83	-0.6
6,216,471	+		Pf6N2E2_5412	0.83	+0.4
6,216,472	-		Pf6N2E2_5412	0.84	+0.4
6,216,472	-		Pf6N2E2_5412	0.84	+0.4
6,216,477	+		Pf6N2E2_5412	0.84	-0.6
6,216,477	+		Pf6N2E2_5412	0.84	+0.4
6,216,477	+		Pf6N2E2_5412	0.84	+0.4
6,216,477	+		Pf6N2E2_5412	0.84	-0.9
6,216,478	-		Pf6N2E2_5412	0.84	+0.4
6,216,478	-		Pf6N2E2_5412	0.84	-0.2
6,216,478	-		Pf6N2E2_5412	0.84	-0.6
6,216,491	+		Pf6N2E2_5412	0.86	-1.6
6,216,491	+		Pf6N2E2_5412	0.86	-0.6
6,216,491	+		Pf6N2E2_5412	0.86	+0.4
6,216,491	+		Pf6N2E2_5412	0.86	-0.6
6,216,491	+		Pf6N2E2_5412	0.86	+0.4
6,216,519	+		Pf6N2E2_5412	0.89	+0.4
6,216,520	-		Pf6N2E2_5412	0.89	+0.4
6,216,520	-		Pf6N2E2_5412	0.89	+0.4
6,216,520	-		Pf6N2E2_5412	0.89	-0.2
6,216,520	-		Pf6N2E2_5412	0.89	+0.4
6,216,748	+				+0.4
6,216,748	+				+0.4
6,216,748	+				+0.4
6,216,749	-				+0.4
6,216,749	-				-0.9
6,216,749	-				-0.6
6,216,749	-				-0.6
6,216,749	-				-1.2
6,216,773	+				-1.2
6,216,774	-				-0.6
6,216,788	-		Pf6N2E2_5413	0.12	-0.9
6,216,941	-		Pf6N2E2_5413	0.56	-0.6
6,216,961	+		Pf6N2E2_5413	0.62	+0.4
6,216,961	+		Pf6N2E2_5413	0.62	-0.8
6,216,961	+		Pf6N2E2_5413	0.62	+0.4
6,216,962	-		Pf6N2E2_5413	0.62	+0.4
6,216,962	-		Pf6N2E2_5413	0.62	-1.2
6,216,962	-		Pf6N2E2_5413	0.62	-1.3
6,216,962	-		Pf6N2E2_5413	0.62	+0.1
6,217,109	-				+0.4
6,217,109	-				-0.8
6,217,179	+				+0.4
6,217,303	-		Pf6N2E2_5414	0.20	+0.4
6,217,326	+		Pf6N2E2_5414	0.22	-0.6
6,217,326	+		Pf6N2E2_5414	0.22	-0.1
6,217,327	-		Pf6N2E2_5414	0.22	+0.4
6,217,327	-		Pf6N2E2_5414	0.22	+0.4
6,217,327	-		Pf6N2E2_5414	0.22	+0.4
6,217,327	-		Pf6N2E2_5414	0.22	+0.4
6,217,327	-		Pf6N2E2_5414	0.22	-0.4
6,217,327	-		Pf6N2E2_5414	0.22	+0.4
6,217,414	-		Pf6N2E2_5414	0.31	+0.4
6,217,602	+		Pf6N2E2_5414	0.50	-0.6
6,217,602	+		Pf6N2E2_5414	0.50	-1.2
6,217,602	+		Pf6N2E2_5414	0.50	-0.2
6,217,602	+		Pf6N2E2_5414	0.50	-1.2
6,217,602	+		Pf6N2E2_5414	0.50	-0.6
6,217,602	+		Pf6N2E2_5414	0.50	+0.4
6,217,602	+		Pf6N2E2_5414	0.50	+0.4
6,217,602	+		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	-0.6
6,217,603	-		Pf6N2E2_5414	0.50	-0.2
6,217,603	-		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	-0.6
6,217,603	-		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	+0.4
6,217,603	-		Pf6N2E2_5414	0.50	-0.1