Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5242

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,038,141	+		Pf6N2E2_5241	0.89	-1.2
6,038,141	+		Pf6N2E2_5241	0.89	+0.4
6,038,225	+				-1.9
6,038,225	+				+0.4
6,038,226	-				-0.6
6,038,237	+				-0.7
6,038,237	+				-1.2
6,038,246	-				+0.4
6,038,260	-				-1.0
6,038,352	+				+0.4
6,038,375	-				-0.5
6,038,550	+				-1.1
6,038,574	+				+0.4
6,038,575	-				+0.4
6,038,579	+				-0.6
6,038,579	+				+0.4
6,038,579	+				-0.6
6,038,579	+				+0.4
6,038,579	+				+0.4
6,038,580	-				+0.4
6,038,580	-				-0.6
6,038,580	-				-1.2
6,038,580	-				-1.2
6,038,580	-				+0.4
6,038,580	-				-0.6
6,038,580	-				+0.4
6,038,582	+				+0.4
6,038,582	+				-0.6
6,038,582	+				-0.6
6,038,582	+				-1.2
6,038,582	+				-1.2
6,038,617	+				-1.2
6,038,617	+				+0.4
6,038,618	-				+0.4
6,038,618	-				+0.4
6,038,618	-				-0.6
6,038,618	-				-0.6
6,038,622	-				+0.4
6,038,622	-				+0.4
6,038,622	-				+0.4
6,038,751	+				-1.2
6,038,752	-				+0.4
6,038,754	+				-0.6
6,038,778	-				+0.4
6,038,835	-				-0.6
6,038,872	+				+0.4
6,039,777	-		Pf6N2E2_5242	0.59	+0.4
6,039,950	+		Pf6N2E2_5242	0.71	-4.6
6,039,951	-		Pf6N2E2_5242	0.71	-1.3
6,039,951	-		Pf6N2E2_5242	0.71	+0.4
6,040,101	-		Pf6N2E2_5242	0.81	-3.0
6,040,101	-		Pf6N2E2_5242	0.81	+0.4
6,040,361	-				-1.6
6,040,428	-		Pf6N2E2_5243	0.26	-0.7
6,040,469	-		Pf6N2E2_5243	0.48	-0.6
6,040,564	+				-1.6
6,040,590	-				+0.4
6,040,694	+				-1.2
6,040,850	-				+0.4
6,040,850	-				+0.0
6,040,850	-				+0.4
6,040,892	-				-0.4
6,041,006	-				-0.2
6,041,051	+				+0.4
6,041,051	+				+0.4
6,041,051	+				-0.6
6,041,052	-				+0.4
6,041,052	-				-0.6
6,041,052	-				-1.2
6,041,053	+				+0.4
6,041,054	-				+0.4
6,041,054	-				-0.6
6,041,101	+				+0.4
6,041,346	+				+0.4
6,041,346	+				-0.6
6,041,346	+				+0.4
6,041,346	+				-0.6