Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5209

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,008,207	-		Pf6N2E2_5208	0.23	+0.4
6,008,271	+		Pf6N2E2_5208	0.30	-2.2
6,008,271	+		Pf6N2E2_5208	0.30	+0.4
6,008,272	-		Pf6N2E2_5208	0.30	-0.6
6,008,332	+		Pf6N2E2_5208	0.37	-0.7
6,008,332	+		Pf6N2E2_5208	0.37	+0.4
6,008,332	+		Pf6N2E2_5208	0.37	-0.4
6,008,332	+		Pf6N2E2_5208	0.37	-0.6
6,008,333	-		Pf6N2E2_5208	0.37	-0.6
6,008,333	-		Pf6N2E2_5208	0.37	+0.4
6,008,333	-		Pf6N2E2_5208	0.37	-1.7
6,008,333	-		Pf6N2E2_5208	0.37	-0.2
6,008,333	-		Pf6N2E2_5208	0.37	+0.1
6,008,333	-		Pf6N2E2_5208	0.37	+0.4
6,008,542	+		Pf6N2E2_5208	0.59	-1.4
6,008,542	+		Pf6N2E2_5208	0.59	+0.4
6,008,542	+		Pf6N2E2_5208	0.59	+0.4
6,008,542	+		Pf6N2E2_5208	0.59	+0.4
6,008,542	+		Pf6N2E2_5208	0.59	+0.4
6,008,542	+		Pf6N2E2_5208	0.59	-2.4
6,008,542	+		Pf6N2E2_5208	0.59	-1.2
6,008,542	+		Pf6N2E2_5208	0.59	+0.4
6,008,542	+		Pf6N2E2_5208	0.59	+0.4
6,008,542	+		Pf6N2E2_5208	0.59	-0.2
6,008,543	-		Pf6N2E2_5208	0.59	-1.1
6,008,543	-		Pf6N2E2_5208	0.59	+0.4
6,008,543	-		Pf6N2E2_5208	0.59	+0.4
6,008,543	-		Pf6N2E2_5208	0.59	-0.6
6,008,543	-		Pf6N2E2_5208	0.59	+0.4
6,008,543	-		Pf6N2E2_5208	0.59	-1.2
6,008,543	-		Pf6N2E2_5208	0.59	+0.4
6,008,628	+		Pf6N2E2_5208	0.68	-0.6
6,008,629	-		Pf6N2E2_5208	0.68	-0.6
6,008,641	+		Pf6N2E2_5208	0.70	-0.6
6,008,641	+		Pf6N2E2_5208	0.70	-0.4
6,008,641	+		Pf6N2E2_5208	0.70	-0.6
6,008,641	+		Pf6N2E2_5208	0.70	+0.4
6,008,641	+		Pf6N2E2_5208	0.70	-0.6
6,008,641	+		Pf6N2E2_5208	0.70	-0.4
6,008,641	+		Pf6N2E2_5208	0.70	-0.9
6,008,641	+		Pf6N2E2_5208	0.70	-0.5
6,008,641	+		Pf6N2E2_5208	0.70	-1.9
6,008,642	-		Pf6N2E2_5208	0.70	+0.4
6,008,642	-		Pf6N2E2_5208	0.70	+0.4
6,008,642	-		Pf6N2E2_5208	0.70	+0.4
6,008,642	-		Pf6N2E2_5208	0.70	-0.3
6,008,642	-		Pf6N2E2_5208	0.70	-0.6
6,008,642	-		Pf6N2E2_5208	0.70	+0.4
6,008,642	-		Pf6N2E2_5208	0.70	+0.4
6,008,642	-		Pf6N2E2_5208	0.70	-2.2
6,008,642	-		Pf6N2E2_5208	0.70	-0.6
6,008,642	-		Pf6N2E2_5208	0.70	+0.4
6,008,642	-		Pf6N2E2_5208	0.70	-0.3
6,008,642	-		Pf6N2E2_5208	0.70	-0.6
6,008,749	-		Pf6N2E2_5208	0.81	-1.8
6,008,778	+		Pf6N2E2_5208	0.84	-0.6
6,008,778	+		Pf6N2E2_5208	0.84	+0.4
6,008,778	+		Pf6N2E2_5208	0.84	+0.4
6,008,779	-		Pf6N2E2_5208	0.85	-0.6
6,008,779	-		Pf6N2E2_5208	0.85	+0.4
6,008,799	+		Pf6N2E2_5208	0.87	+0.4
6,008,799	+		Pf6N2E2_5208	0.87	-1.2
6,008,903	-				+0.4
6,008,907	-				-1.2
6,009,009	+				-2.6
6,009,009	+				-1.6
6,009,009	+				-1.2
6,009,009	+				-1.6
6,009,009	+				-0.6
6,009,009	+				+0.4
6,009,009	+				-1.2
6,009,009	+				-0.8
6,009,009	+				-0.4
6,009,009	+				-0.7
6,009,009	+				+0.4
6,009,009	+				-0.6
6,009,009	+				+0.4
6,009,009	+				+0.4
6,009,010	-				-1.2
6,009,010	-				+0.4
6,009,010	-				-0.5
6,009,010	-				+0.4
6,009,010	-				-0.6
6,009,010	-				-0.6
6,009,010	-				-1.2
6,009,010	-				+0.4
6,009,010	-				-0.2
6,009,010	-				+0.4
6,009,010	-				-0.1
6,009,010	-				-1.2
6,009,010	-				-0.7
6,009,010	-				-1.2
6,009,010	-				+0.4
6,009,010	-				-0.6
6,009,010	-				+0.4
6,009,012	+				-1.2
6,009,024	-				-1.2
6,009,052	-				-0.6
6,009,163	+				-0.6
6,009,163	+				+0.4
6,009,163	+				+2.4
6,009,164	-				+0.4
6,009,350	-		Pf6N2E2_5209	0.32	-1.2
6,009,386	+		Pf6N2E2_5209	0.37	+0.4
6,009,417	+		Pf6N2E2_5209	0.41	-2.4
6,009,417	+		Pf6N2E2_5209	0.41	-1.2
6,009,418	-		Pf6N2E2_5209	0.41	-0.6
6,009,437	+		Pf6N2E2_5209	0.44	-0.6
6,009,567	+		Pf6N2E2_5209	0.60	-0.6
6,009,644	+		Pf6N2E2_5209	0.70	-0.9
6,009,645	-		Pf6N2E2_5209	0.71	+0.4
6,009,681	+		Pf6N2E2_5209	0.75	-0.8
6,009,681	+		Pf6N2E2_5209	0.75	+0.4
6,009,832	+				-0.6
6,009,832	+				-0.5
6,009,833	-				+0.4
6,009,833	-				-1.6
6,009,833	-				-0.9
6,009,866	+				-2.8
6,009,866	+				+0.4
6,009,867	-				+0.4
6,009,870	+				-0.6
6,009,870	+				-1.4
6,009,870	+				+0.4
6,009,870	+				+0.4
6,009,870	+				+0.4
6,009,871	-				+0.4
6,009,871	-				+0.4
6,009,871	-				+0.4
6,009,871	-				-1.8
6,009,871	-				+0.7
6,009,907	+				-1.6
6,009,908	-				-0.6
6,010,071	+		Pf6N2E2_5210	0.54	+0.4
6,010,071	+		Pf6N2E2_5210	0.54	-0.6
6,010,072	-		Pf6N2E2_5210	0.54	+0.4
6,010,177	+		Pf6N2E2_5210	0.86	+0.4
6,010,177	+		Pf6N2E2_5210	0.86	+0.4
6,010,177	+		Pf6N2E2_5210	0.86	+0.4
6,010,225	+				+0.4
6,010,225	+				-1.6
6,010,225	+				-0.6
6,010,225	+				-0.8
6,010,225	+				+0.4
6,010,225	+				-0.6
6,010,225	+				+0.4
6,010,226	-				-0.6
6,010,227	+				-0.6
6,010,227	+				-0.6
6,010,228	-				+0.4
6,010,228	-				+0.4
6,010,228	-				-0.2
6,010,228	-				+0.4
6,010,278	+				+0.4
6,010,278	+				+0.4
6,010,278	+				-1.2
6,010,279	-				-0.2
6,010,279	-				+0.2
6,010,279	-				-0.6
6,010,279	-				-0.6
6,010,279	-				+0.4
6,010,352	+				-0.5
6,010,352	+				-0.8
6,010,352	+				+0.7
6,010,353	-				-0.6
6,010,353	-				+0.4
6,010,353	-				-0.9
6,010,353	-				-1.2
6,010,353	-				+1.4
6,010,493	+		Pf6N2E2_5211	0.20	-1.2
6,010,494	-		Pf6N2E2_5211	0.20	-0.6
6,010,494	-		Pf6N2E2_5211	0.20	-1.2
6,010,494	-		Pf6N2E2_5211	0.20	-0.6
6,010,494	-		Pf6N2E2_5211	0.20	+0.4
6,010,497	+		Pf6N2E2_5211	0.20	-1.6
6,010,497	+		Pf6N2E2_5211	0.20	-0.3
6,010,497	+		Pf6N2E2_5211	0.20	-0.6
6,010,497	+		Pf6N2E2_5211	0.20	+0.3
6,010,497	+		Pf6N2E2_5211	0.20	-1.2
6,010,497	+		Pf6N2E2_5211	0.20	+0.4
6,010,498	-		Pf6N2E2_5211	0.20	+0.4
6,010,498	-		Pf6N2E2_5211	0.20	+0.4
6,010,498	-		Pf6N2E2_5211	0.20	+0.4
6,010,560	+		Pf6N2E2_5211	0.26	+0.4
6,010,561	-		Pf6N2E2_5211	0.26	+0.4
6,010,596	+		Pf6N2E2_5211	0.29	+1.6
6,010,597	-		Pf6N2E2_5211	0.29	-0.6
6,010,598	+		Pf6N2E2_5211	0.29	+0.1
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	-0.6
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	-0.6
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	-0.6
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	-0.3
6,010,598	+		Pf6N2E2_5211	0.29	-0.6
6,010,598	+		Pf6N2E2_5211	0.29	-1.2
6,010,598	+		Pf6N2E2_5211	0.29	-0.6
6,010,599	-		Pf6N2E2_5211	0.29	-1.2
6,010,599	-		Pf6N2E2_5211	0.29	+0.4
6,010,599	-		Pf6N2E2_5211	0.29	+0.4
6,010,599	-		Pf6N2E2_5211	0.29	+0.4
6,010,599	-		Pf6N2E2_5211	0.29	-1.9
6,010,624	-		Pf6N2E2_5211	0.31	-1.1
6,010,706	+		Pf6N2E2_5211	0.39	-0.6
6,010,713	-		Pf6N2E2_5211	0.39	-0.6
6,010,747	+		Pf6N2E2_5211	0.42	+0.4
6,010,767	+		Pf6N2E2_5211	0.44	-1.2
6,010,767	+		Pf6N2E2_5211	0.44	+0.4
6,010,769	+		Pf6N2E2_5211	0.44	+0.4
6,010,769	+		Pf6N2E2_5211	0.44	-0.6
6,010,769	+		Pf6N2E2_5211	0.44	+0.4
6,010,769	+		Pf6N2E2_5211	0.44	+0.4
6,010,769	+		Pf6N2E2_5211	0.44	+0.4
6,010,869	+		Pf6N2E2_5211	0.53	-0.6
6,010,869	+		Pf6N2E2_5211	0.53	+0.3
6,010,870	-		Pf6N2E2_5211	0.53	+0.4