Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4838

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
5,589,011	-		Pf6N2E2_4836	0.59	-2.1
5,589,139	+		Pf6N2E2_4836	0.71	+0.5
5,589,140	-		Pf6N2E2_4836	0.71	-0.5
5,589,218	+		Pf6N2E2_4836	0.79	-1.1
5,589,219	-		Pf6N2E2_4836	0.79	-0.5
5,589,443	+				+0.0
5,589,443	+				-1.9
5,589,444	-				-1.5
5,589,444	-				-1.1
5,589,444	-				-0.5
5,589,459	+				-0.9
5,589,460	-				-0.5
5,589,460	-				-0.5
5,589,460	-				+0.5
5,589,464	+				-1.9
5,589,464	+				+0.0
5,589,464	+				+0.5
5,589,464	+				+0.5
5,589,464	+				-1.7
5,589,464	+				-1.5
5,589,464	+				+0.5
5,589,464	+				-0.5
5,589,465	-				+0.5
5,589,482	-				-0.5
5,589,482	-				-1.1
5,589,488	+				+0.5
5,589,488	+				+0.5
5,589,488	+				-0.5
5,589,488	+				-0.6
5,589,488	+				-0.5
5,589,953	+				-0.5
5,589,999	+				-0.6
5,590,018	+				+0.5
5,590,018	+				-0.5
5,590,019	-				-0.8
5,590,055	+				-0.5
5,590,147	+		Pf6N2E2_4838	0.13	-0.5
5,590,147	+		Pf6N2E2_4838	0.13	-0.4
5,590,147	+		Pf6N2E2_4838	0.13	-1.1
5,590,147	+		Pf6N2E2_4838	0.13	+1.5
5,590,148	-		Pf6N2E2_4838	0.13	+0.5
5,590,148	-		Pf6N2E2_4838	0.13	-0.1
5,590,157	+		Pf6N2E2_4838	0.14	-0.0
5,590,172	+		Pf6N2E2_4838	0.15	-0.5
5,590,250	+		Pf6N2E2_4838	0.22	-0.0
5,590,317	+		Pf6N2E2_4838	0.28	+0.1
5,590,317	+		Pf6N2E2_4838	0.28	+0.5
5,590,318	-		Pf6N2E2_4838	0.28	-0.9
5,590,318	-		Pf6N2E2_4838	0.28	-0.5
5,590,318	-		Pf6N2E2_4838	0.28	+0.5
5,590,380	+		Pf6N2E2_4838	0.34	+0.5
5,590,380	+		Pf6N2E2_4838	0.34	+0.5
5,590,381	-		Pf6N2E2_4838	0.34	+0.5
5,590,381	-		Pf6N2E2_4838	0.34	-0.5
5,590,519	-		Pf6N2E2_4838	0.47	-1.5
5,590,519	-		Pf6N2E2_4838	0.47	+0.5
5,590,519	-		Pf6N2E2_4838	0.47	-0.5
5,590,536	+		Pf6N2E2_4838	0.48	-0.1
5,590,536	+		Pf6N2E2_4838	0.48	-0.5
5,590,536	+		Pf6N2E2_4838	0.48	+0.5
5,590,536	+		Pf6N2E2_4838	0.48	+1.0
5,590,537	-		Pf6N2E2_4838	0.48	+0.5
5,590,537	-		Pf6N2E2_4838	0.48	-0.0
5,590,537	-		Pf6N2E2_4838	0.48	+0.5
5,590,585	-		Pf6N2E2_4838	0.53	+1.6
5,590,585	-		Pf6N2E2_4838	0.53	-1.1
5,590,776	+		Pf6N2E2_4838	0.70	-1.5
5,590,777	-		Pf6N2E2_4838	0.70	-1.1
5,590,777	-		Pf6N2E2_4838	0.70	+0.5
5,590,777	-		Pf6N2E2_4838	0.70	+0.5
5,590,781	+		Pf6N2E2_4838	0.71	-0.1
5,590,781	+		Pf6N2E2_4838	0.71	-0.3
5,590,782	-		Pf6N2E2_4838	0.71	+0.5
5,590,900	-		Pf6N2E2_4838	0.82	+0.5
5,590,916	+		Pf6N2E2_4838	0.83	-0.3
5,590,999	+				+0.5
5,590,999	+				+0.5
5,590,999	+				-0.5
5,590,999	+				-0.9
5,591,000	-				-0.1
5,591,000	-				-0.0
5,591,000	-				-0.5
5,591,000	-				+0.5
5,591,089	+				+0.5
5,591,089	+				+0.5
5,591,089	+				-0.5
5,591,089	+				-0.8
5,591,089	+				-1.1
5,591,089	+				+1.5
5,591,090	-				-0.3
5,591,090	-				+0.5
5,591,090	-				+0.3
5,591,090	-				-0.3
5,591,090	-				-1.1