Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_472

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
536,873	-		Pf6N2E2_471	0.42	-1.2
536,942	+		Pf6N2E2_471	0.48	-0.7
536,943	-		Pf6N2E2_471	0.48	+0.3
537,095	+		Pf6N2E2_471	0.63	-0.7
537,096	-		Pf6N2E2_471	0.63	+0.3
537,127	-		Pf6N2E2_471	0.66	-1.2
537,170	+		Pf6N2E2_471	0.70	-0.7
537,170	+		Pf6N2E2_471	0.70	+0.3
537,170	+		Pf6N2E2_471	0.70	+0.9
537,170	+		Pf6N2E2_471	0.70	+0.3
537,171	-		Pf6N2E2_471	0.70	-1.3
537,171	-		Pf6N2E2_471	0.70	-0.7
537,452	+				+0.3
537,452	+				-1.3
537,452	+				+0.3
537,453	-				+0.3
537,453	-				+0.3
537,453	-				+0.3
537,453	-				-1.3
537,505	-				+0.3
537,833	+		Pf6N2E2_472	0.15	+0.3
537,833	+		Pf6N2E2_472	0.15	-0.7
537,833	+		Pf6N2E2_472	0.15	-1.7
537,904	+		Pf6N2E2_472	0.36	-0.7
537,904	+		Pf6N2E2_472	0.36	-0.7
537,905	-		Pf6N2E2_472	0.36	+0.3
537,905	-		Pf6N2E2_472	0.36	+0.3
538,031	-		Pf6N2E2_472	0.73	-0.7
538,212	-				-1.3
538,617	+		Pf6N2E2_473	0.42	+0.3
538,617	+		Pf6N2E2_473	0.42	-1.3
538,617	+		Pf6N2E2_473	0.42	+0.3
538,617	+		Pf6N2E2_473	0.42	-1.3
538,618	-		Pf6N2E2_473	0.42	-1.3
538,655	-		Pf6N2E2_473	0.46	-0.7
538,655	-		Pf6N2E2_473	0.46	+0.3
538,736	+		Pf6N2E2_473	0.53	+0.3