Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4479

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
5,209,746	+				+0.5
5,209,746	+				-2.7
5,209,746	+				-1.1
5,209,746	+				-0.5
5,209,747	-				+0.5
5,209,780	+				-1.5
5,209,781	-				-0.5
5,210,048	+				-0.5
5,210,048	+				+0.5
5,210,048	+				-1.1
5,210,049	-				-0.5
5,210,049	-				-1.1
5,210,049	-				-0.7
5,210,049	-				+0.5
5,210,051	-				+0.7
5,210,051	-				+0.5
5,210,051	-				-0.5
5,210,051	-				-0.5
5,210,175	+		Pf6N2E2_4477	0.33	-1.5
5,210,314	-		Pf6N2E2_4477	0.76	+0.5
5,210,314	-		Pf6N2E2_4477	0.76	+0.5
5,210,314	-		Pf6N2E2_4477	0.76	+0.5
5,210,343	-		Pf6N2E2_4477	0.86	-0.5
5,210,343	-		Pf6N2E2_4477	0.86	-0.5
5,210,374	-				-0.0
5,210,435	+		Pf6N2E2_4478	0.24	-0.5
5,210,502	+		Pf6N2E2_4478	0.56	+0.5
5,210,502	+		Pf6N2E2_4478	0.56	-1.2
5,210,503	-		Pf6N2E2_4478	0.56	-1.1
5,210,503	-		Pf6N2E2_4478	0.56	-0.2
5,210,503	-		Pf6N2E2_4478	0.56	+0.5
5,210,505	+		Pf6N2E2_4478	0.57	-0.5
5,210,505	+		Pf6N2E2_4478	0.57	-1.5
5,210,505	+		Pf6N2E2_4478	0.57	+0.5
5,210,505	+		Pf6N2E2_4478	0.57	+0.5
5,210,505	+		Pf6N2E2_4478	0.57	+0.5
5,210,506	-		Pf6N2E2_4478	0.58	-0.5
5,210,506	-		Pf6N2E2_4478	0.58	-0.5
5,210,506	-		Pf6N2E2_4478	0.58	-0.5
5,210,506	-		Pf6N2E2_4478	0.58	-0.1
5,210,525	+		Pf6N2E2_4478	0.67	+0.5
5,210,525	+		Pf6N2E2_4478	0.67	+0.5
5,210,525	+		Pf6N2E2_4478	0.67	+0.5
5,210,525	+		Pf6N2E2_4478	0.67	-0.5
5,210,525	+		Pf6N2E2_4478	0.67	-0.5
5,210,526	-		Pf6N2E2_4478	0.67	+0.5
5,210,526	-		Pf6N2E2_4478	0.67	+0.5
5,210,547	+		Pf6N2E2_4478	0.77	+0.5
5,210,547	+		Pf6N2E2_4478	0.77	-0.9
5,210,548	-		Pf6N2E2_4478	0.78	-0.6
5,210,548	-		Pf6N2E2_4478	0.78	+0.5
5,210,548	-		Pf6N2E2_4478	0.78	+0.5
5,210,548	-		Pf6N2E2_4478	0.78	-1.1
5,210,548	-		Pf6N2E2_4478	0.78	-0.5
5,210,628	-				-0.7
5,210,628	-				+0.5
5,210,648	+				-0.5
5,210,671	+				+0.2
5,210,672	-				-0.5
5,210,676	+				+0.5
5,210,676	+				-0.7
5,210,692	+				+0.5
5,210,692	+				+0.5
5,210,692	+				+0.5
5,210,692	+				+0.5
5,210,698	+				-0.5
5,210,698	+				-0.4
5,210,698	+				+0.5
5,210,698	+				+0.5
5,210,698	+				+0.5
5,210,698	+				+0.5
5,210,745	+				+0.5
5,210,745	+				-0.5
5,211,180	+		Pf6N2E2_4479	0.82	-0.5
5,211,198	+		Pf6N2E2_4479	0.85	-1.1
5,211,199	-		Pf6N2E2_4479	0.86	+0.5
5,211,276	+				-0.2
5,211,328	+				-1.5
5,211,328	+				+0.1
5,211,328	+				+0.5
5,211,457	+		Pf6N2E2_4480	0.11	+0.2
5,211,457	+		Pf6N2E2_4480	0.11	-1.6
5,211,523	+		Pf6N2E2_4480	0.16	-0.5
5,211,523	+		Pf6N2E2_4480	0.16	-1.1
5,211,523	+		Pf6N2E2_4480	0.16	+0.5
5,211,607	+		Pf6N2E2_4480	0.23	-0.5
5,211,685	+		Pf6N2E2_4480	0.29	-0.7
5,211,685	+		Pf6N2E2_4480	0.29	-0.4
5,211,685	+		Pf6N2E2_4480	0.29	+0.5
5,211,685	+		Pf6N2E2_4480	0.29	+0.5
5,211,826	+		Pf6N2E2_4480	0.39	-0.4
5,211,826	+		Pf6N2E2_4480	0.39	-0.5
5,211,826	+		Pf6N2E2_4480	0.39	-0.5
5,211,828	+		Pf6N2E2_4480	0.39	-0.2
5,211,828	+		Pf6N2E2_4480	0.39	-0.5
5,211,828	+		Pf6N2E2_4480	0.39	-1.1
5,211,828	+		Pf6N2E2_4480	0.39	-0.5
5,211,828	+		Pf6N2E2_4480	0.39	+0.5
5,211,828	+		Pf6N2E2_4480	0.39	-1.5
5,211,952	+		Pf6N2E2_4480	0.49	-0.5
5,211,952	+		Pf6N2E2_4480	0.49	+0.8
5,211,988	+		Pf6N2E2_4480	0.51	-1.0
5,211,988	+		Pf6N2E2_4480	0.51	-1.1
5,212,033	+		Pf6N2E2_4480	0.55	+0.5
5,212,033	+		Pf6N2E2_4480	0.55	-0.2
5,212,105	+		Pf6N2E2_4480	0.60	-0.5
5,212,171	+		Pf6N2E2_4480	0.65	+0.5
5,212,171	+		Pf6N2E2_4480	0.65	-0.5
5,212,171	+		Pf6N2E2_4480	0.65	+0.5
5,212,171	+		Pf6N2E2_4480	0.65	-0.5
5,212,172	-		Pf6N2E2_4480	0.65	+1.5
5,212,266	+		Pf6N2E2_4480	0.72	+0.5
5,212,266	+		Pf6N2E2_4480	0.72	+0.5
5,212,266	+		Pf6N2E2_4480	0.72	+0.5
5,212,267	-		Pf6N2E2_4480	0.72	+0.5