Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_434

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
500,677	+		Pf6N2E2_433	0.32	-0.2
500,870	-		Pf6N2E2_433	0.50	-0.8
501,122	-		Pf6N2E2_433	0.73	-1.6
501,122	-		Pf6N2E2_433	0.73	-2.0
501,122	-		Pf6N2E2_433	0.73	-0.1
501,122	-		Pf6N2E2_433	0.73	-0.7
501,448	+		Pf6N2E2_434	0.30	-1.3
501,448	+		Pf6N2E2_434	0.30	+0.3
501,525	-		Pf6N2E2_434	0.86	-1.7
501,540	+				+0.3
501,541	-				-0.9
501,541	-				+0.3
501,743	+		Pf6N2E2_435	0.37	-0.9
501,744	-		Pf6N2E2_435	0.38	+0.3
501,744	-		Pf6N2E2_435	0.38	-0.7
501,744	-		Pf6N2E2_435	0.38	-1.3
501,753	-		Pf6N2E2_435	0.39	+0.3
501,851	+		Pf6N2E2_435	0.60	+0.3
501,851	+		Pf6N2E2_435	0.60	-0.7
501,920	+		Pf6N2E2_435	0.74	+0.3
501,921	-		Pf6N2E2_435	0.74	+0.3
501,975	-		Pf6N2E2_435	0.85	+0.6
502,001	+				+0.3
502,001	+				-0.7
502,002	-				+0.3
502,002	-				-0.7
502,002	-				+0.3
502,099	+				+0.3
502,100	-				-1.3
502,206	-		Pf6N2E2_436	0.18	+0.3
502,300	+		Pf6N2E2_436	0.27	+0.3
502,301	-		Pf6N2E2_436	0.27	-0.7
502,301	-		Pf6N2E2_436	0.27	+0.3