Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4178

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
4,861,902	-				-1.5
4,861,902	-				-1.8
4,861,902	-				-1.8
4,861,902	-				-0.5
4,861,943	+				-0.7
4,861,944	-				+0.5
4,861,944	-				-0.8
4,861,944	-				+0.5
4,861,949	+				-0.5
4,861,950	-				+0.5
4,862,016	+				-0.5
4,862,016	+				+0.5
4,862,016	+				-0.5
4,862,016	+				-0.7
4,862,017	-				-0.5
4,862,020	-				+0.5
4,862,020	-				+0.5
4,862,020	-				+1.5
4,862,025	+				+0.5
4,862,025	+				+0.5
4,862,025	+				-1.1
4,862,025	+				-1.1
4,862,025	+				-0.6
4,862,025	+				-1.1
4,862,025	+				-0.5
4,862,026	-				-1.1
4,862,026	-				-0.5
4,862,026	-				-1.0
4,862,026	-				+0.5
4,862,026	-				-0.7
4,862,083	+				-0.3
4,862,084	-				+0.5
4,862,084	-				+0.5
4,862,084	-				-1.8
4,862,084	-				+0.5
4,862,084	-				+0.5
4,862,160	+				+0.1
4,862,233	+				-0.5
4,862,270	+				+0.5
4,862,270	+				+0.5
4,862,270	+				-0.5
4,862,270	+				+0.5
4,862,270	+				-1.1
4,862,270	+				+0.7
4,862,271	-				-1.5
4,862,290	+				-0.5
4,862,290	+				-1.1
4,862,290	+				-0.9
4,862,291	-				-1.1
4,862,291	-				-1.7
4,862,304	+				+0.5
4,862,304	+				+0.8
4,862,304	+				-1.1
4,862,304	+				-0.9
4,862,304	+				-0.5
4,862,305	-				-1.8
4,862,325	+				-1.1
4,862,333	-				-1.1
4,862,355	+				-1.1
4,862,355	+				-0.5
4,862,355	+				-1.8
4,862,355	+				-1.1
4,862,355	+				-0.5
4,862,355	+				+0.5
4,862,355	+				-0.5
4,862,355	+				+0.5
4,862,356	-				-1.6
4,862,356	-				-1.5
4,862,356	-				+0.5
4,862,356	-				-0.5
4,862,356	-				+0.5
4,862,435	+				-0.5
4,862,457	+				-0.5
4,862,457	+				+0.5
4,862,457	+				-1.1
4,862,457	+				-0.5
4,862,457	+				-1.8
4,862,458	-				-0.5
4,862,458	-				-0.5
4,862,458	-				-0.5
4,862,508	+		Pf6N2E2_4177	0.13	-0.5
4,862,508	+		Pf6N2E2_4177	0.13	+0.5
4,862,508	+		Pf6N2E2_4177	0.13	-0.5
4,862,508	+		Pf6N2E2_4177	0.13	-1.5
4,862,509	-		Pf6N2E2_4177	0.13	-0.3
4,862,509	-		Pf6N2E2_4177	0.13	-0.5
4,862,509	-		Pf6N2E2_4177	0.13	+0.5
4,862,620	-		Pf6N2E2_4177	0.56	+0.5
4,862,620	-		Pf6N2E2_4177	0.56	+0.5
4,862,654	+		Pf6N2E2_4177	0.69	-2.3
4,862,655	-		Pf6N2E2_4177	0.70	-2.1
4,862,662	+		Pf6N2E2_4177	0.72	-0.5
4,862,738	-				-0.5
4,862,882	+				+0.5
4,862,882	+				+0.5
4,862,883	-				-0.4
4,862,883	-				+0.5
4,863,023	-		Pf6N2E2_4178	0.20	-0.9
4,863,092	+		Pf6N2E2_4178	0.30	-0.5
4,863,093	-		Pf6N2E2_4178	0.30	+0.5
4,863,093	-		Pf6N2E2_4178	0.30	-0.6
4,863,093	-		Pf6N2E2_4178	0.30	+0.5
4,863,093	-		Pf6N2E2_4178	0.30	+0.5
4,863,093	-		Pf6N2E2_4178	0.30	-0.7
4,863,149	+		Pf6N2E2_4178	0.39	-0.1
4,863,149	+		Pf6N2E2_4178	0.39	+0.5
4,863,150	-		Pf6N2E2_4178	0.39	+0.5
4,863,194	+		Pf6N2E2_4178	0.45	-1.8
4,863,243	+		Pf6N2E2_4178	0.52	+0.5
4,863,243	+		Pf6N2E2_4178	0.52	-0.5
4,863,244	-		Pf6N2E2_4178	0.52	+0.9
4,863,244	-		Pf6N2E2_4178	0.52	-1.1
4,863,244	-		Pf6N2E2_4178	0.52	-0.1
4,863,244	-		Pf6N2E2_4178	0.52	+0.5
4,863,244	-		Pf6N2E2_4178	0.52	-1.8
4,863,244	-		Pf6N2E2_4178	0.52	-0.5
4,863,244	-		Pf6N2E2_4178	0.52	+0.5
4,863,244	-		Pf6N2E2_4178	0.52	-0.5
4,863,311	+		Pf6N2E2_4178	0.62	+0.1
4,863,311	+		Pf6N2E2_4178	0.62	-1.1
4,863,383	+		Pf6N2E2_4178	0.72	+0.5
4,863,384	-		Pf6N2E2_4178	0.72	-1.1
4,863,384	-		Pf6N2E2_4178	0.72	-0.5
4,863,384	-		Pf6N2E2_4178	0.72	-0.1
4,863,384	-		Pf6N2E2_4178	0.72	-1.1
4,863,522	-				+0.5
4,863,522	-				+0.5
4,863,534	+				-0.0
4,863,535	-				-1.5
4,863,535	-				+0.5
4,863,677	+				+0.5
4,863,702	-				+0.5
4,863,850	+		Pf6N2E2_4179	0.22	-0.5
4,863,850	+		Pf6N2E2_4179	0.22	+0.5
4,863,850	+		Pf6N2E2_4179	0.22	-2.1
4,863,850	+		Pf6N2E2_4179	0.22	-0.5
4,863,850	+		Pf6N2E2_4179	0.22	-0.8
4,863,850	+		Pf6N2E2_4179	0.22	+0.5
4,863,850	+		Pf6N2E2_4179	0.22	+0.5
4,863,851	-		Pf6N2E2_4179	0.22	+0.5
4,863,851	-		Pf6N2E2_4179	0.22	+1.1
4,863,853	+		Pf6N2E2_4179	0.22	-0.5
4,863,936	-		Pf6N2E2_4179	0.37	+0.1
4,863,976	+		Pf6N2E2_4179	0.44	+0.5
4,863,976	+		Pf6N2E2_4179	0.44	-1.0
4,863,977	-		Pf6N2E2_4179	0.44	-1.1
4,863,977	-		Pf6N2E2_4179	0.44	+0.5
4,864,048	+		Pf6N2E2_4179	0.57	+0.5
4,864,048	+		Pf6N2E2_4179	0.57	-1.1
4,864,048	+		Pf6N2E2_4179	0.57	-0.5
4,864,070	+		Pf6N2E2_4179	0.61	+0.1
4,864,071	-		Pf6N2E2_4179	0.61	+0.5
4,864,071	-		Pf6N2E2_4179	0.61	-1.3
4,864,071	-		Pf6N2E2_4179	0.61	+0.3
4,864,124	+		Pf6N2E2_4179	0.70	-0.5
4,864,147	-		Pf6N2E2_4179	0.74	-0.5
4,864,147	-		Pf6N2E2_4179	0.74	-0.8
4,864,183	+		Pf6N2E2_4179	0.81	+0.2
4,864,183	+		Pf6N2E2_4179	0.81	-1.1
4,864,183	+		Pf6N2E2_4179	0.81	-0.5
4,864,184	-		Pf6N2E2_4179	0.81	-0.5
4,864,184	-		Pf6N2E2_4179	0.81	+0.5
4,864,185	+		Pf6N2E2_4179	0.81	-1.1
4,864,208	+		Pf6N2E2_4179	0.85	-0.7
4,864,209	-		Pf6N2E2_4179	0.85	-0.5
4,864,209	-		Pf6N2E2_4179	0.85	-0.5
4,864,209	-		Pf6N2E2_4179	0.85	-0.5
4,864,253	+				-0.5
4,864,253	+				-1.1
4,864,261	+				+0.5
4,864,396	+				+0.5
4,864,409	+				-0.4
4,864,410	-				-1.1
4,864,427	+				-0.5
4,864,428	-				+0.5
4,864,502	+				-0.5
4,864,502	+				-1.7
4,864,502	+				-1.5
4,864,503	-				+0.5
4,864,503	-				-0.8
4,864,536	+				-0.5
4,864,536	+				+0.5
4,864,536	+				-1.1
4,864,536	+				+0.5
4,864,536	+				+0.5