Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4160

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
4,840,969	-				+0.5
4,840,969	-				+0.5
4,840,969	-				+0.5
4,841,008	-				-1.1
4,841,008	-				-1.1
4,841,008	-				+0.3
4,841,037	+				-0.5
4,841,038	-				-0.5
4,841,038	-				-0.5
4,841,133	+				+0.5
4,841,133	+				-1.8
4,841,133	+				-0.5
4,841,133	+				-1.6
4,841,133	+				-0.2
4,841,133	+				-1.1
4,841,133	+				-0.5
4,841,133	+				-1.1
4,841,133	+				+0.5
4,841,133	+				+0.5
4,841,133	+				-1.1
4,841,133	+				+0.5
4,841,134	-				+0.5
4,841,134	-				-2.1
4,841,134	-				+0.5
4,841,134	-				-0.5
4,841,134	-				+0.1
4,841,134	-				-0.5
4,841,134	-				-0.5
4,841,134	-				-0.3
4,841,134	-				-0.5
4,841,134	-				-0.5
4,841,134	-				+0.2
4,841,181	+				-1.4
4,841,182	-				-2.0
4,841,304	-		Pf6N2E2_4159	0.23	-2.1
4,841,304	-		Pf6N2E2_4159	0.23	-1.9
4,841,304	-		Pf6N2E2_4159	0.23	-1.1
4,841,307	+		Pf6N2E2_4159	0.24	-1.8
4,841,307	+		Pf6N2E2_4159	0.24	-2.5
4,841,308	-		Pf6N2E2_4159	0.24	-2.0
4,841,491	-		Pf6N2E2_4159	0.54	-1.5
4,841,644	+		Pf6N2E2_4159	0.79	-2.2
4,841,645	-		Pf6N2E2_4159	0.79	-1.2
4,841,778	+				-0.5
4,841,787	+				-1.1
4,841,787	+				-3.7
4,841,788	-				-1.0
4,841,788	-				-1.1
4,841,809	-				-0.5
4,841,809	-				-0.5
4,841,809	-				-0.5
4,841,809	-				-1.1
4,841,852	-		Pf6N2E2_4160	0.27	-1.5
4,841,936	+				-1.1
4,842,031	+				-2.1
4,842,032	-				-0.5
4,842,032	-				-0.5
4,842,032	-				-0.5
4,842,032	-				+0.5
4,842,032	-				+0.5
4,842,032	-				+0.5
4,842,032	-				-0.5
4,842,053	+				-1.8
4,842,053	+				+0.5
4,842,054	-				-0.5
4,842,068	-				-2.1
4,842,093	+				+0.5
4,842,094	-				+0.5
4,842,148	+				-3.1
4,842,149	-				+0.3
4,842,189	+				-1.8
4,842,189	+				-1.3
4,842,190	-				-0.3
4,842,190	-				-0.5
4,842,190	-				+0.5
4,842,225	+				-1.8
4,842,225	+				-3.0
4,842,226	-				-0.6
4,842,226	-				+0.5
4,842,226	-				-1.5
4,842,226	-				-0.5
4,842,226	-				-1.0
4,842,226	-				-0.5
4,842,227	+				-1.3
4,842,227	+				-1.7
4,842,228	-				+0.1
4,842,228	-				+0.5
4,842,229	+				-1.7
4,842,229	+				+0.5
4,842,229	+				-0.9