Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3932

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
4,567,308	+		Pf6N2E2_3930	0.50	-1.1
4,567,308	+		Pf6N2E2_3930	0.50	-0.5
4,567,308	+		Pf6N2E2_3930	0.50	-0.8
4,567,308	+		Pf6N2E2_3930	0.50	+1.2
4,567,308	+		Pf6N2E2_3930	0.50	-1.3
4,567,308	+		Pf6N2E2_3930	0.50	+0.5
4,567,308	+		Pf6N2E2_3930	0.50	+0.5
4,567,309	-		Pf6N2E2_3930	0.50	-0.1
4,567,309	-		Pf6N2E2_3930	0.50	-0.5
4,567,309	-		Pf6N2E2_3930	0.50	-0.3
4,567,309	-		Pf6N2E2_3930	0.50	+0.5
4,567,309	-		Pf6N2E2_3930	0.50	+0.5
4,567,309	-		Pf6N2E2_3930	0.50	-0.6
4,567,309	-		Pf6N2E2_3930	0.50	+0.3
4,567,309	-		Pf6N2E2_3930	0.50	+0.5
4,567,309	-		Pf6N2E2_3930	0.50	-1.0
4,567,309	-		Pf6N2E2_3930	0.50	-0.4
4,567,309	-		Pf6N2E2_3930	0.50	+0.5
4,567,309	-		Pf6N2E2_3930	0.50	-0.5
4,567,309	-		Pf6N2E2_3930	0.50	+0.5
4,567,330	+		Pf6N2E2_3930	0.54	+0.5
4,567,330	+		Pf6N2E2_3930	0.54	+0.0
4,567,330	+		Pf6N2E2_3930	0.54	+0.5
4,567,331	-		Pf6N2E2_3930	0.54	+0.5
4,567,331	-		Pf6N2E2_3930	0.54	-1.1
4,567,331	-		Pf6N2E2_3930	0.54	+0.5
4,567,392	+		Pf6N2E2_3930	0.65	-0.7
4,567,392	+		Pf6N2E2_3930	0.65	+0.5
4,567,392	+		Pf6N2E2_3930	0.65	+0.5
4,567,393	-		Pf6N2E2_3930	0.65	-0.5
4,567,393	-		Pf6N2E2_3930	0.65	-0.5
4,567,563	+				-0.6
4,567,609	+				-2.1
4,567,609	+				+0.5
4,567,609	+				+0.5
4,567,609	+				-1.3
4,567,609	+				-0.5
4,567,609	+				-1.1
4,567,609	+				-1.3
4,567,609	+				+0.5
4,567,609	+				-0.5
4,567,609	+				-0.8
4,567,610	-				-0.5
4,567,610	-				-2.1
4,567,610	-				+0.5
4,567,610	-				-1.2
4,567,610	-				-0.5
4,567,613	+				-1.1
4,567,613	+				+0.5
4,567,613	+				-0.5
4,567,613	+				-0.3
4,567,613	+				-1.1
4,567,614	-				+0.5
4,567,614	-				+0.5
4,567,614	-				-0.1
4,567,615	+				+0.5
4,567,615	+				-1.7
4,567,616	-				-0.5
4,567,616	-				+0.0
4,567,616	-				-0.5
4,567,647	+				-1.5
4,567,740	+				+0.5
4,567,740	+				-1.2
4,567,741	-				+0.5
4,567,777	-		Pf6N2E2_3931	0.15	-0.5
4,567,826	+		Pf6N2E2_3931	0.26	-0.5
4,567,827	-		Pf6N2E2_3931	0.27	+0.5
4,567,827	-		Pf6N2E2_3931	0.27	+0.5
4,567,827	-		Pf6N2E2_3931	0.27	+0.2
4,567,827	-		Pf6N2E2_3931	0.27	+0.5
4,567,827	-		Pf6N2E2_3931	0.27	+0.5
4,567,827	-		Pf6N2E2_3931	0.27	+0.5
4,567,827	-		Pf6N2E2_3931	0.27	-0.4
4,567,827	-		Pf6N2E2_3931	0.27	+0.5
4,568,067	+		Pf6N2E2_3931	0.80	-0.5
4,568,067	+		Pf6N2E2_3931	0.80	-1.1
4,568,067	+		Pf6N2E2_3931	0.80	-0.5
4,568,067	+		Pf6N2E2_3931	0.80	-1.1
4,568,067	+		Pf6N2E2_3931	0.80	-0.5
4,568,067	+		Pf6N2E2_3931	0.80	+0.5
4,568,067	+		Pf6N2E2_3931	0.80	+1.0
4,568,067	+		Pf6N2E2_3931	0.80	+0.5
4,568,068	-		Pf6N2E2_3931	0.81	-0.5
4,568,100	+		Pf6N2E2_3931	0.88	+0.5
4,568,100	+		Pf6N2E2_3931	0.88	+0.5
4,568,100	+		Pf6N2E2_3931	0.88	-0.4
4,568,100	+		Pf6N2E2_3931	0.88	-2.3
4,568,101	-		Pf6N2E2_3931	0.88	-0.5
4,568,152	+				-0.5
4,568,152	+				-2.0
4,568,152	+				-0.8
4,568,153	-				-1.1
4,568,181	-				+0.5
4,568,199	-				+0.5
4,568,199	-				-0.1
4,568,236	+				-0.3
4,568,236	+				-0.6
4,568,236	+				-0.5
4,568,236	+				+0.5
4,568,236	+				-0.5
4,568,236	+				-0.5
4,568,237	-				+0.8
4,568,237	-				-0.5
4,568,237	-				-1.5
4,568,237	-				-0.5
4,568,237	-				-0.5
4,568,237	-				+0.5
4,568,237	-				-0.5
4,568,329	+				-3.0
4,568,329	+				+0.5
4,568,507	+		Pf6N2E2_3932	0.22	+0.5
4,568,507	+		Pf6N2E2_3932	0.22	-4.1
4,568,508	-		Pf6N2E2_3932	0.22	-0.5
4,568,521	+		Pf6N2E2_3932	0.23	-3.1
4,568,522	-		Pf6N2E2_3932	0.23	-0.5
4,568,522	-		Pf6N2E2_3932	0.23	+0.5
4,568,522	-		Pf6N2E2_3932	0.23	-3.9
4,568,926	+		Pf6N2E2_3932	0.56	-3.7
4,568,926	+		Pf6N2E2_3932	0.56	-3.5
4,568,927	-		Pf6N2E2_3932	0.56	+0.5
4,568,927	-		Pf6N2E2_3932	0.56	+0.5
4,569,149	-		Pf6N2E2_3932	0.74	-2.7
4,569,355	+				-2.3
4,569,355	+				-3.7
4,569,356	-				-0.5
4,569,356	-				+0.5
4,569,356	-				+0.5
4,569,356	-				+0.5
4,569,356	-				-5.1
4,569,356	-				-0.5
4,569,371	-				-0.5
4,569,371	-				+0.5
4,569,444	-				-3.7
4,569,520	-				+0.5
4,569,568	-				-0.5
4,569,583	+				+0.5
4,569,583	+				+0.5
4,569,588	+				+0.5
4,569,589	-				+0.5
4,569,589	-				+0.5
4,569,589	-				-0.5
4,569,589	-				+0.5
4,569,589	-				-0.1
4,569,593	+				-0.6
4,569,593	+				+0.5
4,569,593	+				-0.5
4,569,593	+				-1.3
4,569,593	+				+0.5
4,569,593	+				-1.5
4,569,593	+				-0.5
4,569,594	-				-0.5
4,569,594	-				-0.5
4,569,594	-				-0.2
4,569,594	-				+0.5
4,569,594	-				-0.5
4,569,594	-				+0.5
4,569,594	-				-1.1
4,569,690	+				-1.1
4,569,690	+				+0.5
4,569,690	+				-0.5
4,569,690	+				-1.1
4,569,691	-				-0.9
4,569,691	-				-1.5
4,569,691	-				+0.5
4,569,691	-				-0.5
4,569,691	-				+0.5
4,569,890	-		Pf6N2E2_3933	0.17	-0.5
4,569,947	+		Pf6N2E2_3933	0.21	+0.5
4,569,947	+		Pf6N2E2_3933	0.21	+0.5
4,569,947	+		Pf6N2E2_3933	0.21	-2.1
4,569,948	-		Pf6N2E2_3933	0.21	+0.5
4,569,948	-		Pf6N2E2_3933	0.21	-0.7
4,569,948	-		Pf6N2E2_3933	0.21	-1.1
4,569,948	-		Pf6N2E2_3933	0.21	+0.5
4,570,239	-		Pf6N2E2_3933	0.42	+0.5
4,570,239	-		Pf6N2E2_3933	0.42	+0.5