Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3808

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
4,436,519	-				-0.2
4,436,555	-				-0.6
4,436,555	-				-0.5
4,436,555	-				+1.5
4,436,555	-				-1.7
4,436,635	+		Pf6N2E2_3807	0.11	+1.0
4,436,652	-		Pf6N2E2_3807	0.14	-2.1
4,436,760	+		Pf6N2E2_3807	0.28	+0.5
4,436,761	-		Pf6N2E2_3807	0.28	-0.5
4,436,767	-		Pf6N2E2_3807	0.29	-0.5
4,436,799	+		Pf6N2E2_3807	0.33	-0.3
4,436,799	+		Pf6N2E2_3807	0.33	-1.1
4,437,007	+		Pf6N2E2_3807	0.61	-0.5
4,437,007	+		Pf6N2E2_3807	0.61	+0.5
4,437,008	-		Pf6N2E2_3807	0.61	-1.2
4,437,008	-		Pf6N2E2_3807	0.61	+0.2
4,437,235	-				+1.1
4,437,329	+				+0.3
4,437,330	-				+0.5
4,437,330	-				+0.5
4,437,330	-				-0.5
4,437,330	-				+0.5
4,437,330	-				-0.1
4,437,365	+				-2.1
4,437,365	+				-0.8
4,437,367	+				-0.8
4,437,367	+				+0.5
4,437,368	-				+0.5
4,437,371	+				+0.5
4,437,371	+				+0.1
4,437,371	+				+0.5
4,437,371	+				+0.5
4,437,371	+				-0.5
4,437,372	-				-1.1
4,437,372	-				-0.5
4,437,372	-				-1.2
4,437,374	-				-0.9
4,437,374	-				-0.5
4,437,458	+				+0.5
4,437,458	+				+0.5
4,437,458	+				-3.4
4,437,458	+				+0.5
4,437,458	+				+0.5
4,437,459	-				-0.5
4,437,459	-				+0.5
4,437,658	+		Pf6N2E2_3808	0.19	+0.5
4,437,659	-		Pf6N2E2_3808	0.19	-0.5
4,437,715	+		Pf6N2E2_3808	0.23	-2.7
4,437,716	-		Pf6N2E2_3808	0.23	-0.5
4,437,716	-		Pf6N2E2_3808	0.23	+0.5
4,437,739	+		Pf6N2E2_3808	0.25	-0.5
4,437,763	+		Pf6N2E2_3808	0.26	-4.1
4,437,763	+		Pf6N2E2_3808	0.26	-0.5
4,437,763	+		Pf6N2E2_3808	0.26	-3.6
4,437,763	+		Pf6N2E2_3808	0.26	-1.5
4,437,764	-		Pf6N2E2_3808	0.26	-1.8
4,437,764	-		Pf6N2E2_3808	0.26	-1.1
4,437,764	-		Pf6N2E2_3808	0.26	+0.5
4,437,794	-		Pf6N2E2_3808	0.29	-0.5
4,437,877	+		Pf6N2E2_3808	0.35	-2.1
4,437,877	+		Pf6N2E2_3808	0.35	-2.7
4,437,878	-		Pf6N2E2_3808	0.35	+0.5
4,437,878	-		Pf6N2E2_3808	0.35	-1.5
4,437,949	+		Pf6N2E2_3808	0.40	+0.5
4,437,950	-		Pf6N2E2_3808	0.40	-0.5
4,438,169	+		Pf6N2E2_3808	0.56	-1.8
4,438,169	+		Pf6N2E2_3808	0.56	-0.5
4,438,450	+		Pf6N2E2_3808	0.77	-0.5
4,438,467	+		Pf6N2E2_3808	0.78	-5.9
4,438,591	+		Pf6N2E2_3808	0.87	-0.5
4,438,591	+		Pf6N2E2_3808	0.87	-1.1
4,438,592	-		Pf6N2E2_3808	0.87	-0.5
4,438,592	-		Pf6N2E2_3808	0.87	-0.5
4,438,592	-		Pf6N2E2_3808	0.87	+0.5
4,438,659	-				-0.5
4,438,760	+				+0.5
4,438,760	+				-0.5
4,438,761	-				+0.5
4,438,761	-				-1.1
4,438,775	-				-1.1
4,438,826	+				+0.1
4,438,826	+				-1.8
4,438,827	-				-0.3
4,438,827	-				-0.1
4,438,838	+				-0.9
4,438,838	+				-1.5
4,438,839	-				-0.5
4,438,876	+				+0.5
4,438,876	+				-0.2
4,438,876	+				+0.5
4,438,876	+				-0.4
4,438,876	+				-0.4
4,438,877	-				-1.3
4,438,877	-				-0.8
4,438,950	+		Pf6N2E2_3809	0.11	+0.5
4,438,951	-		Pf6N2E2_3809	0.11	-0.2
4,438,951	-		Pf6N2E2_3809	0.11	-0.1
4,439,032	-		Pf6N2E2_3809	0.25	-1.1
4,439,032	-		Pf6N2E2_3809	0.25	+0.5
4,439,032	-		Pf6N2E2_3809	0.25	-0.5
4,439,067	+		Pf6N2E2_3809	0.31	-0.5
4,439,067	+		Pf6N2E2_3809	0.31	+0.5
4,439,067	+		Pf6N2E2_3809	0.31	-1.1
4,439,068	-		Pf6N2E2_3809	0.32	-1.4
4,439,068	-		Pf6N2E2_3809	0.32	-1.1
4,439,068	-		Pf6N2E2_3809	0.32	+0.3
4,439,082	+		Pf6N2E2_3809	0.34	+0.5
4,439,082	+		Pf6N2E2_3809	0.34	+0.5
4,439,082	+		Pf6N2E2_3809	0.34	+0.8
4,439,082	+		Pf6N2E2_3809	0.34	+0.5
4,439,082	+		Pf6N2E2_3809	0.34	-0.5
4,439,082	+		Pf6N2E2_3809	0.34	+0.5
4,439,083	-		Pf6N2E2_3809	0.34	-0.5
4,439,083	-		Pf6N2E2_3809	0.34	+0.5
4,439,083	-		Pf6N2E2_3809	0.34	-1.5
4,439,083	-		Pf6N2E2_3809	0.34	-0.6
4,439,095	-		Pf6N2E2_3809	0.36	-0.5
4,439,271	+		Pf6N2E2_3809	0.67	+0.5
4,439,271	+		Pf6N2E2_3809	0.67	+0.5
4,439,271	+		Pf6N2E2_3809	0.67	-0.5
4,439,272	-		Pf6N2E2_3809	0.68	-1.0
4,439,272	-		Pf6N2E2_3809	0.68	-1.1
4,439,272	-		Pf6N2E2_3809	0.68	+0.5
4,439,307	+		Pf6N2E2_3809	0.74	-0.5
4,439,307	+		Pf6N2E2_3809	0.74	-1.1
4,439,308	-		Pf6N2E2_3809	0.74	-0.6
4,439,308	-		Pf6N2E2_3809	0.74	-1.1
4,439,308	-		Pf6N2E2_3809	0.74	+0.5
4,439,308	-		Pf6N2E2_3809	0.74	-0.5
4,439,308	-		Pf6N2E2_3809	0.74	-1.1
4,439,332	-		Pf6N2E2_3809	0.78	-1.1
4,439,447	+				-1.1
4,439,459	+				+0.5
4,439,494	+				+0.5
4,439,494	+				+0.5
4,439,495	-				-1.1
4,439,495	-				+0.0
4,439,509	-				+0.5
4,439,525	+				+0.5
4,439,526	-				+0.5
4,439,526	-				-1.5
4,439,526	-				-0.5
4,439,539	+				-0.5
4,439,539	+				+0.5
4,439,539	+				+0.5
4,439,540	-				-0.5
4,439,540	-				-1.2
4,439,540	-				+0.5
4,439,545	+				+0.6
4,439,545	+				+0.5
4,439,546	-				+0.5
4,439,546	-				+0.5
4,439,546	-				+0.5
4,439,566	+				+0.5
4,439,567	-				-0.5
4,439,567	-				+0.5
4,439,611	+		Pf6N2E2_3810	0.18	+0.5
4,439,743	+		Pf6N2E2_3810	0.70	+0.5
4,439,743	+		Pf6N2E2_3810	0.70	+0.5
4,439,744	-		Pf6N2E2_3810	0.70	+0.5