Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3709

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
4,323,150	+				-2.7
4,323,150	+				+0.5
4,323,150	+				-0.5
4,323,150	+				+0.5
4,323,150	+				+0.5
4,323,151	-				-0.3
4,323,195	+		Pf6N2E2_3708	0.11	-0.5
4,323,195	+		Pf6N2E2_3708	0.11	-0.5
4,323,195	+		Pf6N2E2_3708	0.11	+1.1
4,323,195	+		Pf6N2E2_3708	0.11	-1.1
4,323,196	-		Pf6N2E2_3708	0.11	-0.5
4,323,196	-		Pf6N2E2_3708	0.11	-0.8
4,323,198	+		Pf6N2E2_3708	0.11	-0.5
4,323,198	+		Pf6N2E2_3708	0.11	-1.3
4,323,198	+		Pf6N2E2_3708	0.11	-0.5
4,323,198	+		Pf6N2E2_3708	0.11	-0.5
4,323,308	+		Pf6N2E2_3708	0.22	-1.1
4,323,463	+		Pf6N2E2_3708	0.37	+0.5
4,323,463	+		Pf6N2E2_3708	0.37	+0.5
4,323,463	+		Pf6N2E2_3708	0.37	-0.5
4,323,464	-		Pf6N2E2_3708	0.37	-1.1
4,323,464	-		Pf6N2E2_3708	0.37	-1.5
4,323,464	-		Pf6N2E2_3708	0.37	+0.5
4,323,510	-		Pf6N2E2_3708	0.42	-0.4
4,323,636	-		Pf6N2E2_3708	0.55	+0.5
4,323,951	+		Pf6N2E2_3708	0.86	+0.5
4,323,951	+		Pf6N2E2_3708	0.86	+0.5
4,323,952	-		Pf6N2E2_3708	0.86	-0.5
4,324,070	+				+0.5
4,324,228	+		Pf6N2E2_3709	0.16	+0.5
4,324,228	+		Pf6N2E2_3709	0.16	+0.5
4,324,343	+		Pf6N2E2_3709	0.31	-0.5
4,324,384	+		Pf6N2E2_3709	0.36	+0.5
4,324,385	-		Pf6N2E2_3709	0.36	+0.6
4,324,504	+		Pf6N2E2_3709	0.52	+0.9
4,324,504	+		Pf6N2E2_3709	0.52	+0.5
4,324,633	+		Pf6N2E2_3709	0.68	-0.1
4,324,633	+		Pf6N2E2_3709	0.68	-1.1
4,324,633	+		Pf6N2E2_3709	0.68	-0.5
4,324,633	+		Pf6N2E2_3709	0.68	-0.5
4,324,633	+		Pf6N2E2_3709	0.68	+0.5
4,324,634	-		Pf6N2E2_3709	0.69	+0.5
4,324,638	-		Pf6N2E2_3709	0.69	-0.2
4,324,700	+		Pf6N2E2_3709	0.77	-0.2
4,324,701	-		Pf6N2E2_3709	0.77	-0.1
4,324,738	+		Pf6N2E2_3709	0.82	-1.2
4,324,739	-		Pf6N2E2_3709	0.82	-0.4
4,324,890	+				-0.5
4,324,890	+				-0.5
4,324,909	+				+0.5
4,324,910	-				-0.5
4,324,910	-				+0.4
4,324,910	-				-1.1
4,324,910	-				+0.5
4,324,910	-				+0.5
4,324,910	-				-0.5
4,324,910	-				-1.0
4,324,910	-				-0.5
4,324,912	+				+0.5
4,324,912	+				+0.5
4,324,913	-				-0.5
4,324,913	-				-0.5
4,324,913	-				-0.5
4,324,929	+				+0.5
4,324,929	+				+0.5
4,324,929	+				-0.5
4,324,930	-				-1.1
4,324,933	+				+0.4
4,324,933	+				+0.1
4,324,933	+				+0.5
4,324,934	-				-0.5
4,324,954	-				+0.5
4,324,954	-				-0.5
4,325,101	+				+0.5
4,325,115	+				-0.7
4,325,115	+				-1.1
4,325,115	+				-0.5
4,325,115	+				-0.5
4,325,115	+				-0.5
4,325,116	-				-0.5
4,325,116	-				-1.1
4,325,205	+				-0.8
4,325,205	+				+0.5
4,325,206	-				-1.1
4,325,325	+		Pf6N2E2_3710	0.13	-0.6
4,325,325	+		Pf6N2E2_3710	0.13	-1.7
4,325,451	+		Pf6N2E2_3710	0.30	-0.2
4,325,451	+		Pf6N2E2_3710	0.30	+0.5
4,325,452	-		Pf6N2E2_3710	0.30	-2.1
4,325,452	-		Pf6N2E2_3710	0.30	-0.6
4,325,464	+		Pf6N2E2_3710	0.32	+0.5
4,325,464	+		Pf6N2E2_3710	0.32	+0.5
4,325,464	+		Pf6N2E2_3710	0.32	+0.5
4,325,464	+		Pf6N2E2_3710	0.32	-0.4
4,325,464	+		Pf6N2E2_3710	0.32	-1.1
4,325,465	-		Pf6N2E2_3710	0.32	-0.5
4,325,735	+		Pf6N2E2_3710	0.70	-1.1
4,325,735	+		Pf6N2E2_3710	0.70	-1.0
4,325,735	+		Pf6N2E2_3710	0.70	-0.7
4,325,735	+		Pf6N2E2_3710	0.70	+0.0
4,325,736	-		Pf6N2E2_3710	0.70	-0.5
4,325,736	-		Pf6N2E2_3710	0.70	+0.0
4,325,736	-		Pf6N2E2_3710	0.70	-1.1
4,325,736	-		Pf6N2E2_3710	0.70	-1.1
4,325,736	-		Pf6N2E2_3710	0.70	-0.5
4,325,768	+		Pf6N2E2_3710	0.74	+0.2
4,325,769	-		Pf6N2E2_3710	0.74	-0.5
4,325,785	-		Pf6N2E2_3710	0.77	-0.6