Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3645

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
4,244,930	+		Pf6N2E2_3644	0.75	+0.5
4,244,931	-		Pf6N2E2_3644	0.75	-0.4
4,244,931	-		Pf6N2E2_3644	0.75	-1.0
4,244,931	-		Pf6N2E2_3644	0.75	+0.5
4,244,931	-		Pf6N2E2_3644	0.75	-0.2
4,244,966	+		Pf6N2E2_3644	0.77	-0.5
4,244,966	+		Pf6N2E2_3644	0.77	+0.5
4,244,967	-		Pf6N2E2_3644	0.77	-0.5
4,245,200	+		Pf6N2E2_3644	0.89	+0.5
4,245,201	-		Pf6N2E2_3644	0.89	-1.1
4,245,656	+				+0.5
4,245,656	+				-0.5
4,245,656	+				-0.5
4,245,657	-				-0.6
4,245,657	-				-1.8
4,245,657	-				-0.5
4,245,746	+				+0.5
4,245,746	+				-2.4
4,245,746	+				+0.5
4,245,746	+				-0.5
4,245,746	+				-0.5
4,245,746	+				-0.5
4,245,746	+				-0.5
4,245,747	-				-1.1
4,245,747	-				-0.5
4,245,747	-				-1.1
4,245,748	+				-0.6
4,245,748	+				-0.8
4,245,748	+				+0.1
4,245,748	+				-0.5
4,245,748	+				-0.1
4,245,749	-				-0.5
4,245,749	-				+0.5
4,245,749	-				-1.1
4,245,749	-				-1.1
4,245,749	-				+0.5
4,245,778	+				-0.5
4,245,779	-				+0.5
4,245,779	-				-1.8
4,245,822	+				+0.5
4,245,822	+				+0.5
4,245,823	-				+0.5
4,245,823	-				-1.1
4,245,823	-				+0.5
4,245,823	-				-4.5
4,245,823	-				+0.5
4,245,823	-				-1.1
4,245,823	-				-6.0
4,245,823	-				-0.5
4,245,940	+				-1.1
4,245,940	+				+0.5
4,245,940	+				-1.1
4,246,126	+		Pf6N2E2_3645	0.20	+0.5
4,246,408	+		Pf6N2E2_3645	0.40	-1.1
4,246,409	-		Pf6N2E2_3645	0.40	-0.5
4,246,409	-		Pf6N2E2_3645	0.40	-1.8
4,246,495	+		Pf6N2E2_3645	0.46	-1.5
4,246,495	+		Pf6N2E2_3645	0.46	+0.5
4,246,496	-		Pf6N2E2_3645	0.46	-1.1
4,246,573	-		Pf6N2E2_3645	0.51	-0.5
4,246,599	-		Pf6N2E2_3645	0.53	-1.1
4,246,612	+		Pf6N2E2_3645	0.54	+0.5
4,246,613	-		Pf6N2E2_3645	0.54	+0.5
4,246,613	-		Pf6N2E2_3645	0.54	-5.8
4,246,635	+		Pf6N2E2_3645	0.56	-4.2
4,246,636	-		Pf6N2E2_3645	0.56	+0.5
4,246,691	-		Pf6N2E2_3645	0.59	-1.8
4,246,691	-		Pf6N2E2_3645	0.59	-3.4
4,246,794	+		Pf6N2E2_3645	0.67	+0.5
4,247,065	+		Pf6N2E2_3645	0.85	-1.5
4,247,065	+		Pf6N2E2_3645	0.85	-0.5
4,247,066	-		Pf6N2E2_3645	0.85	-0.5
4,247,066	-		Pf6N2E2_3645	0.85	-0.1
4,247,066	-		Pf6N2E2_3645	0.85	-4.2
4,247,066	-		Pf6N2E2_3645	0.85	+0.5
4,247,066	-		Pf6N2E2_3645	0.85	-1.1
4,247,083	+		Pf6N2E2_3645	0.87	-2.5
4,247,083	+		Pf6N2E2_3645	0.87	-4.6
4,247,083	+		Pf6N2E2_3645	0.87	-0.5
4,247,083	+		Pf6N2E2_3645	0.87	-1.1
4,247,084	-		Pf6N2E2_3645	0.87	-5.7
4,247,084	-		Pf6N2E2_3645	0.87	+0.5
4,247,084	-		Pf6N2E2_3645	0.87	+0.5
4,247,104	+		Pf6N2E2_3645	0.88	+0.5
4,247,104	+		Pf6N2E2_3645	0.88	-0.5
4,247,104	+		Pf6N2E2_3645	0.88	-1.1
4,247,104	+		Pf6N2E2_3645	0.88	-1.1
4,247,104	+		Pf6N2E2_3645	0.88	-1.1
4,247,105	-		Pf6N2E2_3645	0.88	+0.5
4,247,105	-		Pf6N2E2_3645	0.88	-0.5
4,247,105	-		Pf6N2E2_3645	0.88	-1.1
4,247,105	-		Pf6N2E2_3645	0.88	-1.5
4,247,105	-		Pf6N2E2_3645	0.88	-4.7
4,247,105	-		Pf6N2E2_3645	0.88	-5.7
4,247,105	-		Pf6N2E2_3645	0.88	-2.2
4,247,179	+				-1.1
4,247,180	-				+0.5
4,247,194	+				+0.5
4,247,194	+				-5.2
4,247,195	-				-0.5
4,247,195	-				+0.5
4,247,195	-				+0.5
4,247,272	+				-0.5
4,247,273	-				-0.8
4,247,277	+				+1.5
4,247,277	+				+0.5
4,247,278	-				-0.8
4,247,278	-				+0.5
4,247,278	-				-0.5
4,247,278	-				-0.5
4,247,285	+				+0.2
4,247,285	+				-0.5
4,247,285	+				-0.5
4,247,285	+				-0.7
4,247,285	+				-1.9
4,247,285	+				+0.5
4,247,285	+				-0.5
4,247,285	+				-1.1
4,247,285	+				+0.5
4,247,286	-				-0.5
4,247,286	-				+0.5
4,247,286	-				-0.5
4,247,286	-				-1.1
4,247,286	-				-0.8
4,247,286	-				+0.5
4,247,286	-				-2.1
4,247,300	-				+0.5
4,247,348	+				-1.1
4,247,348	+				-0.5
4,247,348	+				-0.5
4,247,411	+				+0.5
4,247,412	-				+0.5