Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3621

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
4,216,002	+		Pf6N2E2_3620	0.15	-0.5
4,216,002	+		Pf6N2E2_3620	0.15	+0.5
4,216,002	+		Pf6N2E2_3620	0.15	+0.5
4,216,003	-		Pf6N2E2_3620	0.15	+0.5
4,216,003	-		Pf6N2E2_3620	0.15	+0.5
4,216,003	-		Pf6N2E2_3620	0.15	-1.5
4,216,003	-		Pf6N2E2_3620	0.15	-0.5
4,216,087	-		Pf6N2E2_3620	0.23	+0.5
4,216,087	-		Pf6N2E2_3620	0.23	+1.5
4,216,087	-		Pf6N2E2_3620	0.23	-0.5
4,216,140	+		Pf6N2E2_3620	0.28	+0.5
4,216,140	+		Pf6N2E2_3620	0.28	+0.5
4,216,140	+		Pf6N2E2_3620	0.28	-0.5
4,216,141	-		Pf6N2E2_3620	0.28	-2.1
4,216,141	-		Pf6N2E2_3620	0.28	+0.5
4,216,141	-		Pf6N2E2_3620	0.28	-0.5
4,216,152	+		Pf6N2E2_3620	0.29	-1.1
4,216,170	+		Pf6N2E2_3620	0.31	-0.5
4,216,317	-		Pf6N2E2_3620	0.44	-1.2
4,216,353	+		Pf6N2E2_3620	0.47	-1.1
4,216,353	+		Pf6N2E2_3620	0.47	+0.5
4,216,353	+		Pf6N2E2_3620	0.47	+0.5
4,216,354	-		Pf6N2E2_3620	0.48	+0.5
4,216,457	+		Pf6N2E2_3620	0.57	-0.5
4,216,457	+		Pf6N2E2_3620	0.57	-0.5
4,216,457	+		Pf6N2E2_3620	0.57	+0.5
4,216,458	-		Pf6N2E2_3620	0.57	+0.5
4,216,479	+		Pf6N2E2_3620	0.59	-1.1
4,216,479	+		Pf6N2E2_3620	0.59	-0.5
4,216,480	-		Pf6N2E2_3620	0.59	-1.1
4,216,988	-		Pf6N2E2_3621	0.14	-0.8
4,216,988	-		Pf6N2E2_3621	0.14	-1.1
4,216,988	-		Pf6N2E2_3621	0.14	+0.5
4,217,037	+		Pf6N2E2_3621	0.22	-0.5
4,217,037	+		Pf6N2E2_3621	0.22	+0.5
4,217,037	+		Pf6N2E2_3621	0.22	+0.5
4,217,037	+		Pf6N2E2_3621	0.22	+0.5
4,217,037	+		Pf6N2E2_3621	0.22	+0.5
4,217,037	+		Pf6N2E2_3621	0.22	-2.7
4,217,037	+		Pf6N2E2_3621	0.22	-1.5
4,217,070	+		Pf6N2E2_3621	0.28	+0.5
4,217,070	+		Pf6N2E2_3621	0.28	+0.5
4,217,070	+		Pf6N2E2_3621	0.28	-0.5
4,217,071	-		Pf6N2E2_3621	0.28	-0.8
4,217,071	-		Pf6N2E2_3621	0.28	+0.5
4,217,071	-		Pf6N2E2_3621	0.28	+0.5
4,217,099	-		Pf6N2E2_3621	0.32	-0.5
4,217,099	-		Pf6N2E2_3621	0.32	-3.8
4,217,321	+		Pf6N2E2_3621	0.69	+0.5
4,217,321	+		Pf6N2E2_3621	0.69	+0.5
4,217,322	-		Pf6N2E2_3621	0.69	-3.0
4,217,322	-		Pf6N2E2_3621	0.69	-4.8
4,217,322	-		Pf6N2E2_3621	0.69	-0.5
4,217,322	-		Pf6N2E2_3621	0.69	+0.5
4,217,326	-		Pf6N2E2_3621	0.69	-4.0
4,217,326	-		Pf6N2E2_3621	0.69	-3.6
4,217,496	+				+0.5
4,217,496	+				-2.9
4,217,496	+				-3.3
4,217,497	-				-0.5
4,217,598	+				-0.3
4,217,598	+				-2.5
4,217,598	+				-0.5
4,217,599	-				-0.5
4,217,599	-				-1.1
4,218,338	-				+0.5
4,218,338	-				-0.5
4,218,350	+				+0.5
4,218,351	-				+0.1
4,218,351	-				-0.5
4,218,355	+				+0.5
4,218,356	-				+0.5
4,218,356	-				-0.8
4,218,394	-				+0.5
4,218,398	+				-2.3
4,218,398	+				-0.0
4,218,417	+				+0.5