Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3550

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
4,141,273	+		Pf6N2E2_3549	0.13	+0.4
4,141,273	+		Pf6N2E2_3549	0.13	-0.6
4,141,274	-		Pf6N2E2_3549	0.13	+1.4
4,141,274	-		Pf6N2E2_3549	0.13	+0.4
4,141,274	-		Pf6N2E2_3549	0.13	+0.4
4,141,275	+		Pf6N2E2_3549	0.14	-0.6
4,141,275	+		Pf6N2E2_3549	0.14	+0.4
4,141,276	-		Pf6N2E2_3549	0.14	-0.6
4,141,276	-		Pf6N2E2_3549	0.14	+0.4
4,141,276	-		Pf6N2E2_3549	0.14	-0.5
4,141,276	-		Pf6N2E2_3549	0.14	-0.1
4,141,276	-		Pf6N2E2_3549	0.14	-1.1
4,141,276	-		Pf6N2E2_3549	0.14	-0.6
4,141,276	-		Pf6N2E2_3549	0.14	+0.4
4,141,276	-		Pf6N2E2_3549	0.14	+0.4
4,141,276	-		Pf6N2E2_3549	0.14	-0.7
4,141,276	-		Pf6N2E2_3549	0.14	-0.6
4,141,276	-		Pf6N2E2_3549	0.14	-1.1
4,141,396	+		Pf6N2E2_3549	0.25	-0.8
4,141,411	+		Pf6N2E2_3549	0.26	-0.6
4,141,411	+		Pf6N2E2_3549	0.26	+0.4
4,141,411	+		Pf6N2E2_3549	0.26	-0.6
4,141,411	+		Pf6N2E2_3549	0.26	+0.4
4,141,412	-		Pf6N2E2_3549	0.26	+0.4
4,141,412	-		Pf6N2E2_3549	0.26	+0.4
4,141,412	-		Pf6N2E2_3549	0.26	-0.6
4,141,412	-		Pf6N2E2_3549	0.26	-0.1
4,141,412	-		Pf6N2E2_3549	0.26	+0.4
4,141,412	-		Pf6N2E2_3549	0.26	-0.6
4,141,412	-		Pf6N2E2_3549	0.26	+0.4
4,141,412	-		Pf6N2E2_3549	0.26	+0.4
4,141,412	-		Pf6N2E2_3549	0.26	-0.6
4,141,412	-		Pf6N2E2_3549	0.26	+0.4
4,141,412	-		Pf6N2E2_3549	0.26	-1.1
4,141,412	-		Pf6N2E2_3549	0.26	+0.4
4,141,412	-		Pf6N2E2_3549	0.26	-0.6
4,141,486	+		Pf6N2E2_3549	0.33	-0.5
4,141,600	+		Pf6N2E2_3549	0.44	-1.1
4,141,600	+		Pf6N2E2_3549	0.44	-0.6
4,141,601	-		Pf6N2E2_3549	0.44	+0.4
4,141,601	-		Pf6N2E2_3549	0.44	+0.4
4,141,601	-		Pf6N2E2_3549	0.44	-0.6
4,141,945	+		Pf6N2E2_3549	0.76	+0.4
4,141,945	+		Pf6N2E2_3549	0.76	-0.7
4,141,945	+		Pf6N2E2_3549	0.76	+0.4
4,141,945	+		Pf6N2E2_3549	0.76	-1.1
4,141,945	+		Pf6N2E2_3549	0.76	-1.1
4,141,945	+		Pf6N2E2_3549	0.76	-1.1
4,141,945	+		Pf6N2E2_3549	0.76	-0.6
4,141,946	-		Pf6N2E2_3549	0.76	-1.1
4,141,946	-		Pf6N2E2_3549	0.76	-0.6
4,141,946	-		Pf6N2E2_3549	0.76	+0.4
4,141,946	-		Pf6N2E2_3549	0.76	-0.8
4,142,114	-				-0.6
4,142,114	-				-1.1
4,142,114	-				-1.6
4,142,158	+				+0.4
4,142,159	-				-0.6
4,142,159	-				-0.6
4,142,412	+		Pf6N2E2_3550	0.24	-0.6
4,142,413	-		Pf6N2E2_3550	0.24	-0.6
4,142,413	-		Pf6N2E2_3550	0.24	-0.6
4,142,413	-		Pf6N2E2_3550	0.24	-0.6
4,143,060	+				-0.7
4,143,061	-				-1.6
4,143,139	+				+0.4
4,143,139	+				-0.5
4,143,139	+				-0.9
4,143,139	+				-0.6
4,143,139	+				+0.4
4,143,139	+				+0.4
4,143,140	-				+0.4
4,143,140	-				+0.4
4,143,140	-				+0.4
4,143,140	-				+0.4
4,143,140	-				-0.6
4,143,140	-				-0.5
4,143,140	-				-0.6
4,143,140	-				+0.4
4,143,140	-				-0.6
4,143,140	-				-0.2
4,143,140	-				-0.3
4,143,235	+				-0.9
4,143,235	+				-1.6
4,143,235	+				-2.1
4,143,235	+				+0.4
4,143,235	+				-0.9
4,143,236	-				+0.4
4,143,239	-				-0.7
4,143,278	+		Pf6N2E2_3551	0.10	+0.4
4,143,278	+		Pf6N2E2_3551	0.10	+0.4
4,143,445	+		Pf6N2E2_3551	0.34	-0.6
4,143,552	+		Pf6N2E2_3551	0.49	-0.6
4,143,552	+		Pf6N2E2_3551	0.49	+0.4
4,143,552	+		Pf6N2E2_3551	0.49	-0.6
4,143,556	+		Pf6N2E2_3551	0.50	-1.4
4,143,556	+		Pf6N2E2_3551	0.50	-0.2
4,143,557	-		Pf6N2E2_3551	0.50	+0.4
4,143,788	-		Pf6N2E2_3551	0.83	-0.7
4,143,817	+		Pf6N2E2_3551	0.87	-0.6
4,143,817	+		Pf6N2E2_3551	0.87	-0.4
4,143,818	-		Pf6N2E2_3551	0.87	-0.6
4,143,818	-		Pf6N2E2_3551	0.87	+0.4
4,143,818	-		Pf6N2E2_3551	0.87	+0.4
4,143,868	-				+0.4
4,143,904	+				+0.4
4,143,904	+				+0.4
4,143,905	-				+0.4
4,143,905	-				+0.0
4,143,944	+				+0.4
4,143,944	+				-0.6
4,143,944	+				-0.1
4,143,944	+				-0.7
4,143,944	+				-0.7
4,143,945	-				-0.7