Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3424

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,980,116	+				-0.6
3,980,117	-				-1.2
3,980,159	-				-1.6
3,980,189	+				-0.6
3,980,190	-				+0.4
3,980,205	-				-1.2
3,980,210	+				-0.6
3,980,210	+				+0.4
3,980,211	-				-0.6
3,980,211	-				-1.0
3,980,339	-		Pf6N2E2_3423	0.18	+0.4
3,980,368	+		Pf6N2E2_3423	0.22	+0.4
3,980,368	+		Pf6N2E2_3423	0.22	-0.3
3,980,369	-		Pf6N2E2_3423	0.22	+0.4
3,980,369	-		Pf6N2E2_3423	0.22	-0.2
3,980,374	+		Pf6N2E2_3423	0.22	-1.2
3,980,374	+		Pf6N2E2_3423	0.22	+0.4
3,980,374	+		Pf6N2E2_3423	0.22	-1.9
3,980,375	-		Pf6N2E2_3423	0.22	+0.4
3,980,375	-		Pf6N2E2_3423	0.22	+0.4
3,980,375	-		Pf6N2E2_3423	0.22	+1.3
3,980,422	+		Pf6N2E2_3423	0.27	-1.2
3,980,423	-		Pf6N2E2_3423	0.27	+0.4
3,980,451	+		Pf6N2E2_3423	0.30	+0.4
3,980,790	-		Pf6N2E2_3423	0.66	-0.6
3,980,790	-		Pf6N2E2_3423	0.66	+0.4
3,980,790	-		Pf6N2E2_3423	0.66	+0.4
3,980,844	-		Pf6N2E2_3423	0.72	-0.6
3,980,978	+		Pf6N2E2_3423	0.86	-0.6
3,980,992	-		Pf6N2E2_3423	0.87	-0.6
3,981,001	+		Pf6N2E2_3423	0.88	-0.6
3,981,001	+		Pf6N2E2_3423	0.88	+0.4
3,981,001	+		Pf6N2E2_3423	0.88	+0.4
3,981,001	+		Pf6N2E2_3423	0.88	+0.4
3,981,002	-		Pf6N2E2_3423	0.88	-0.0
3,981,002	-		Pf6N2E2_3423	0.88	-0.6
3,981,002	-		Pf6N2E2_3423	0.88	+0.4
3,981,002	-		Pf6N2E2_3423	0.88	-0.3
3,981,441	+		Pf6N2E2_3424	0.39	+0.4
3,981,441	+		Pf6N2E2_3424	0.39	-0.6
3,981,442	-		Pf6N2E2_3424	0.39	-0.6
3,981,442	-		Pf6N2E2_3424	0.39	-0.6
3,981,486	-		Pf6N2E2_3424	0.44	-4.4
3,981,486	-		Pf6N2E2_3424	0.44	+0.4
3,981,488	+		Pf6N2E2_3424	0.44	+0.4
3,981,488	+		Pf6N2E2_3424	0.44	-1.0
3,981,488	+		Pf6N2E2_3424	0.44	-1.2
3,981,489	-		Pf6N2E2_3424	0.44	+0.4
3,981,561	+		Pf6N2E2_3424	0.53	-0.6
3,981,561	+		Pf6N2E2_3424	0.53	-1.2
3,981,561	+		Pf6N2E2_3424	0.53	-1.8
3,981,562	-		Pf6N2E2_3424	0.53	-1.6
3,981,562	-		Pf6N2E2_3424	0.53	-0.6
3,981,564	-		Pf6N2E2_3424	0.53	+0.4
3,981,564	-		Pf6N2E2_3424	0.53	-0.6
3,981,594	+		Pf6N2E2_3424	0.57	-0.9
3,981,595	-		Pf6N2E2_3424	0.57	-1.3
3,981,757	+		Pf6N2E2_3424	0.76	+0.4
3,981,757	+		Pf6N2E2_3424	0.76	+0.4
3,982,317	+		Pf6N2E2_3425	0.36	+0.1
3,982,317	+		Pf6N2E2_3425	0.36	-0.4
3,982,317	+		Pf6N2E2_3425	0.36	-0.6
3,982,318	-		Pf6N2E2_3425	0.36	+0.4
3,982,318	-		Pf6N2E2_3425	0.36	+0.4
3,982,419	-		Pf6N2E2_3425	0.46	-0.6
3,982,533	+		Pf6N2E2_3425	0.58	-1.9
3,982,534	-		Pf6N2E2_3425	0.58	+0.4
3,982,653	-		Pf6N2E2_3425	0.70	+0.4
3,982,653	-		Pf6N2E2_3425	0.70	-0.5
3,982,653	-		Pf6N2E2_3425	0.70	+0.4
3,982,716	-		Pf6N2E2_3425	0.76	-0.6
3,982,716	-		Pf6N2E2_3425	0.76	+0.4
3,982,716	-		Pf6N2E2_3425	0.76	-0.6