Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3373

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,905,003	+		Pf6N2E2_3370	0.87	-0.7
3,905,003	+		Pf6N2E2_3370	0.87	-0.6
3,905,003	+		Pf6N2E2_3370	0.87	-0.6
3,905,004	-		Pf6N2E2_3370	0.87	-1.2
3,905,004	-		Pf6N2E2_3370	0.87	-0.6
3,905,004	-		Pf6N2E2_3370	0.87	+0.4
3,905,004	-		Pf6N2E2_3370	0.87	-0.8
3,905,054	+				+0.4
3,905,054	+				+0.4
3,905,054	+				+0.4
3,905,054	+				+0.4
3,905,054	+				+0.4
3,905,054	+				+0.4
3,905,054	+				+0.4
3,905,054	+				+0.4
3,905,054	+				-1.2
3,905,054	+				+0.4
3,905,054	+				+0.4
3,905,054	+				+0.2
3,905,055	-				-0.6
3,905,055	-				+0.4
3,905,055	-				-0.6
3,905,055	-				+0.4
3,905,055	-				-0.6
3,905,055	-				+0.4
3,905,055	-				-0.6
3,905,055	-				-0.6
3,905,055	-				+0.4
3,905,055	-				-0.6
3,905,064	+				-0.4
3,905,064	+				+0.4
3,905,064	+				-0.6
3,905,064	+				-0.6
3,905,064	+				+0.4
3,905,064	+				-0.6
3,905,065	-				-1.2
3,905,065	-				-1.3
3,905,065	-				-1.1
3,905,069	+				+0.4
3,905,069	+				-0.6
3,905,070	-				-0.6
3,905,070	-				+0.4
3,905,126	+				+0.4
3,905,126	+				-0.6
3,905,126	+				+0.4
3,905,276	-				-0.2
3,905,278	+				-0.3
3,905,279	-				+0.4
3,905,279	-				-1.2
3,905,279	-				-1.7
3,905,279	-				-1.0
3,905,296	+				+0.4
3,905,296	+				-1.6
3,905,297	-				-0.3
3,906,131	+		Pf6N2E2_3373	0.45	-2.2
3,906,131	+		Pf6N2E2_3373	0.45	-1.3
3,906,282	-		Pf6N2E2_3373	0.88	-0.6
3,906,310	-				+0.4
3,906,310	-				-0.2
3,906,322	+				-0.4
3,906,322	+				+0.4
3,906,322	+				+0.4
3,906,322	+				-1.2
3,906,323	-				-1.2
3,906,323	-				+0.1
3,906,323	-				-0.6
3,906,362	-				-1.0
3,906,362	-				-1.2
3,906,385	+				+0.4
3,906,676	-				-3.1
3,906,676	-				-1.2
3,907,129	-				+0.4
3,907,129	-				-0.6
3,907,129	-				-0.6
3,907,129	-				-0.6
3,907,129	-				-0.6
3,907,129	-				-0.6
3,907,129	-				-0.6
3,907,129	-				+0.4
3,907,129	-				-0.6
3,907,162	-				+0.4
3,907,162	-				+0.4
3,907,162	-				+0.4
3,907,162	-				-0.6
3,907,187	-				-0.6
3,907,187	-				-0.6
3,907,187	-				+0.4
3,907,187	-				+0.4
3,907,187	-				+0.4
3,907,187	-				-0.6
3,907,219	-				-0.6