Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3349

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,876,077	+				-1.2
3,876,078	-				-0.6
3,876,145	+				+0.4
3,876,145	+				-0.8
3,876,146	-				-0.6
3,876,146	-				-0.5
3,876,146	-				-0.6
3,876,146	-				-0.6
3,876,146	-				-0.6
3,876,146	-				+0.4
3,876,147	+				-1.0
3,876,147	+				+0.4
3,876,148	-				-1.2
3,876,148	-				-1.2
3,876,169	-				-0.6
3,876,180	+				+0.4
3,876,180	+				+0.4
3,876,180	+				-0.6
3,876,180	+				+0.4
3,876,180	+				-0.2
3,876,180	+				-0.6
3,876,180	+				-0.7
3,876,180	+				-0.6
3,876,180	+				-0.9
3,876,181	-				+0.4
3,876,181	-				-0.7
3,876,181	-				+0.4
3,876,181	-				+0.6
3,876,181	-				-0.3
3,876,181	-				-1.6
3,876,186	+				+0.4
3,876,186	+				+0.4
3,876,186	+				-0.2
3,876,186	+				-0.4
3,876,187	-				-0.5
3,876,187	-				+0.4
3,876,187	-				-1.2
3,876,187	-				+0.4
3,876,209	-				-0.6
3,876,417	+		Pf6N2E2_3348	0.22	+0.4
3,876,417	+		Pf6N2E2_3348	0.22	+0.4
3,876,429	-		Pf6N2E2_3348	0.24	+0.4
3,876,445	-		Pf6N2E2_3348	0.27	-1.2
3,876,462	+		Pf6N2E2_3348	0.30	-0.6
3,876,462	+		Pf6N2E2_3348	0.30	+0.4
3,876,462	+		Pf6N2E2_3348	0.30	-0.6
3,876,462	+		Pf6N2E2_3348	0.30	+0.4
3,876,462	+		Pf6N2E2_3348	0.30	-0.3
3,876,462	+		Pf6N2E2_3348	0.30	+0.4
3,876,463	-		Pf6N2E2_3348	0.30	+0.4
3,876,463	-		Pf6N2E2_3348	0.30	-1.6
3,876,463	-		Pf6N2E2_3348	0.30	-0.6
3,876,463	-		Pf6N2E2_3348	0.30	-1.2
3,876,463	-		Pf6N2E2_3348	0.30	+0.4
3,876,844	-				-0.6
3,876,844	-				-0.6
3,876,923	+		Pf6N2E2_6117	0.88	-0.5
3,876,924	-				+0.4
3,876,944	+				-1.2
3,876,944	+				+0.4
3,876,944	+				-1.2
3,876,945	-				-0.6
3,876,945	-				-0.6
3,876,996	+				-1.1
3,876,996	+				-0.6
3,876,997	-				-1.2
3,876,997	-				-0.6
3,876,997	-				+0.4
3,877,286	+		Pf6N2E2_3349	0.11	-1.2
3,877,286	+		Pf6N2E2_3349	0.11	+0.4
3,877,286	+		Pf6N2E2_3349	0.11	-1.2
3,877,287	-		Pf6N2E2_3349	0.11	+0.4
3,877,287	-		Pf6N2E2_3349	0.11	-1.9
3,879,272	-				+0.4
3,879,272	-				-0.6
3,879,848	-				-2.6
3,879,897	-		Pf6N2E2_3351	0.14	-0.6
3,879,919	-		Pf6N2E2_3351	0.16	-0.6
3,880,102	-		Pf6N2E2_3351	0.36	+0.4
3,880,153	-		Pf6N2E2_3351	0.42	+0.4
3,880,153	-		Pf6N2E2_3351	0.42	+0.4
3,880,153	-		Pf6N2E2_3351	0.42	+0.4
3,880,153	-		Pf6N2E2_3351	0.42	+0.4