Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3318

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,832,724	+				-1.2
3,832,725	-				-0.0
3,832,725	-				+0.4
3,832,740	+				+0.4
3,832,741	-				+0.4
3,832,741	-				-1.2
3,832,741	-				+0.4
3,832,914	+		Pf6N2E2_3317	0.24	-1.2
3,832,914	+		Pf6N2E2_3317	0.24	-0.6
3,832,914	+		Pf6N2E2_3317	0.24	-0.6
3,832,915	-		Pf6N2E2_3317	0.24	-0.8
3,832,948	+		Pf6N2E2_3317	0.27	-0.6
3,833,045	+		Pf6N2E2_3317	0.36	+0.4
3,833,045	+		Pf6N2E2_3317	0.36	-0.6
3,833,046	-		Pf6N2E2_3317	0.36	+0.4
3,833,046	-		Pf6N2E2_3317	0.36	+1.0
3,833,046	-		Pf6N2E2_3317	0.36	+0.4
3,833,046	-		Pf6N2E2_3317	0.36	-0.6
3,833,046	-		Pf6N2E2_3317	0.36	+0.4
3,833,046	-		Pf6N2E2_3317	0.36	+0.4
3,833,046	-		Pf6N2E2_3317	0.36	+0.4
3,833,146	+		Pf6N2E2_3317	0.46	-0.2
3,833,147	-		Pf6N2E2_3317	0.46	+0.4
3,833,147	-		Pf6N2E2_3317	0.46	+0.4
3,833,274	+		Pf6N2E2_3317	0.58	+0.4
3,833,274	+		Pf6N2E2_3317	0.58	+0.4
3,833,275	-		Pf6N2E2_3317	0.58	+0.4
3,833,275	-		Pf6N2E2_3317	0.58	+0.1
3,833,277	+		Pf6N2E2_3317	0.58	+0.4
3,833,277	+		Pf6N2E2_3317	0.58	+0.4
3,833,278	-		Pf6N2E2_3317	0.58	-0.6
3,833,278	-		Pf6N2E2_3317	0.58	-1.0
3,833,473	-		Pf6N2E2_3317	0.77	+0.4
3,833,473	-		Pf6N2E2_3317	0.77	-0.6
3,833,473	-		Pf6N2E2_3317	0.77	+0.4
3,833,558	+		Pf6N2E2_3317	0.85	-1.8
3,833,558	+		Pf6N2E2_3317	0.85	+0.4
3,833,559	-		Pf6N2E2_3317	0.85	-0.6
3,833,559	-		Pf6N2E2_3317	0.85	+0.4
3,833,600	+		Pf6N2E2_3317	0.89	-0.6
3,833,600	+		Pf6N2E2_3317	0.89	-0.8
3,833,695	+				-0.6
3,833,695	+				-0.0
3,833,695	+				-1.2
3,833,695	+				-0.6
3,833,695	+				-1.0
3,833,695	+				-0.6
3,833,695	+				-0.6
3,833,800	-				-0.6
3,833,863	+		Pf6N2E2_3318	0.11	-1.6
3,833,876	+		Pf6N2E2_3318	0.12	-1.2
3,833,877	-		Pf6N2E2_3318	0.12	-0.6
3,834,002	+		Pf6N2E2_3318	0.22	+0.4
3,834,009	-		Pf6N2E2_3318	0.22	+0.4
3,834,009	-		Pf6N2E2_3318	0.22	+0.4
3,834,169	+		Pf6N2E2_3318	0.35	+0.4
3,834,170	-		Pf6N2E2_3318	0.35	-0.6
3,834,170	-		Pf6N2E2_3318	0.35	-0.6
3,834,281	-		Pf6N2E2_3318	0.43	+0.4
3,834,297	+		Pf6N2E2_3318	0.45	+0.4
3,834,297	+		Pf6N2E2_3318	0.45	-0.6
3,834,297	+		Pf6N2E2_3318	0.45	-0.6
3,834,298	-		Pf6N2E2_3318	0.45	-0.6
3,834,298	-		Pf6N2E2_3318	0.45	-0.6
3,834,308	+		Pf6N2E2_3318	0.45	-0.6
3,834,308	+		Pf6N2E2_3318	0.45	-1.6
3,834,308	+		Pf6N2E2_3318	0.45	+0.4
3,834,309	-		Pf6N2E2_3318	0.45	-1.2
3,834,309	-		Pf6N2E2_3318	0.45	-1.0
3,834,309	-		Pf6N2E2_3318	0.45	-0.6
3,834,311	+		Pf6N2E2_3318	0.46	-0.6
3,834,311	+		Pf6N2E2_3318	0.46	+0.4
3,834,311	+		Pf6N2E2_3318	0.46	-1.2
3,834,357	+		Pf6N2E2_3318	0.49	+0.4
3,834,357	+		Pf6N2E2_3318	0.49	+1.7
3,834,357	+		Pf6N2E2_3318	0.49	+0.4
3,834,357	+		Pf6N2E2_3318	0.49	+0.4
3,834,358	-		Pf6N2E2_3318	0.49	-0.6
3,834,358	-		Pf6N2E2_3318	0.49	-0.0
3,834,358	-		Pf6N2E2_3318	0.49	+0.4
3,834,358	-		Pf6N2E2_3318	0.49	-0.6
3,834,358	-		Pf6N2E2_3318	0.49	-3.5
3,834,358	-		Pf6N2E2_3318	0.49	+0.4
3,834,358	-		Pf6N2E2_3318	0.49	-1.2
3,834,358	-		Pf6N2E2_3318	0.49	+0.4
3,834,436	+		Pf6N2E2_3318	0.55	-0.6
3,834,436	+		Pf6N2E2_3318	0.55	+0.4
3,834,436	+		Pf6N2E2_3318	0.55	+0.4
3,834,437	-		Pf6N2E2_3318	0.55	-0.6
3,834,437	-		Pf6N2E2_3318	0.55	+0.4
3,834,437	-		Pf6N2E2_3318	0.55	-0.9
3,834,437	-		Pf6N2E2_3318	0.55	-1.1
3,834,560	-		Pf6N2E2_3318	0.65	-0.6
3,834,682	-		Pf6N2E2_3318	0.74	+0.4
3,834,682	-		Pf6N2E2_3318	0.74	-0.6
3,834,682	-		Pf6N2E2_3318	0.74	-0.6
3,834,682	-		Pf6N2E2_3318	0.74	-1.2
3,834,682	-		Pf6N2E2_3318	0.74	+0.4
3,834,683	+		Pf6N2E2_3318	0.75	+0.4
3,834,696	-		Pf6N2E2_3318	0.76	-1.2
3,834,775	-		Pf6N2E2_3318	0.82	+0.4
3,834,775	-		Pf6N2E2_3318	0.82	-1.0
3,834,784	-		Pf6N2E2_3318	0.82	+1.7
3,834,826	+		Pf6N2E2_3318	0.86	-0.6
3,834,826	+		Pf6N2E2_3318	0.86	+0.4
3,834,826	+		Pf6N2E2_3318	0.86	-0.6
3,834,973	+				+0.4
3,834,973	+				-0.5
3,834,973	+				-0.5
3,834,973	+				+0.4
3,834,974	-				+0.4
3,834,976	+				+0.4
3,834,976	+				+0.4
3,834,976	+				+0.4
3,835,011	+				+0.4
3,835,011	+				+0.4
3,835,012	-				+0.4
3,835,016	-				+0.4
3,835,085	+				+0.4
3,835,134	-				-1.2
3,835,183	-		Pf6N2E2_3319	0.10	+0.4
3,835,354	+		Pf6N2E2_3319	0.21	+0.4
3,835,354	+		Pf6N2E2_3319	0.21	-0.5
3,835,355	-		Pf6N2E2_3319	0.21	+0.4
3,835,493	+		Pf6N2E2_3319	0.29	-0.6
3,835,493	+		Pf6N2E2_3319	0.29	+0.4
3,835,668	-		Pf6N2E2_3319	0.40	-1.2
3,835,702	+		Pf6N2E2_3319	0.42	-0.9
3,835,732	+		Pf6N2E2_3319	0.44	+0.4
3,835,732	+		Pf6N2E2_3319	0.44	-0.4
3,835,732	+		Pf6N2E2_3319	0.44	+0.4
3,835,732	+		Pf6N2E2_3319	0.44	+0.4
3,835,732	+		Pf6N2E2_3319	0.44	-0.6
3,835,732	+		Pf6N2E2_3319	0.44	+0.4
3,835,733	-		Pf6N2E2_3319	0.44	-0.6
3,835,733	-		Pf6N2E2_3319	0.44	+0.4
3,835,733	-		Pf6N2E2_3319	0.44	+0.4
3,835,964	+		Pf6N2E2_3319	0.58	-0.4
3,835,964	+		Pf6N2E2_3319	0.58	-1.2
3,835,964	+		Pf6N2E2_3319	0.58	-1.2
3,835,965	-		Pf6N2E2_3319	0.58	-0.3
3,835,965	-		Pf6N2E2_3319	0.58	+0.4
3,835,965	-		Pf6N2E2_3319	0.58	+0.4