Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3201

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,700,871	+				-1.6
3,700,911	+				-0.7
3,701,178	+				+0.4
3,701,178	+				+0.4
3,701,178	+				+0.4
3,701,179	-				+0.4
3,701,231	+				-0.6
3,701,231	+				+0.4
3,701,231	+				-0.4
3,701,232	-				-1.2
3,701,232	-				+0.4
3,701,372	+				-0.6
3,701,373	-				+0.4
3,701,373	-				-2.0
3,701,373	-				-0.6
3,701,419	+				-1.2
3,701,420	-				-1.2
3,701,420	-				+0.2
3,701,429	-				-0.6
3,701,632	+				-0.6
3,701,632	+				-1.2
3,701,632	+				-0.4
3,701,633	-				-0.9
3,701,633	-				-0.9
3,701,633	-				-0.8
3,701,639	-				-1.2
3,701,639	-				-0.2
3,701,639	-				-1.4
3,701,741	-				+0.4
3,701,741	-				-0.6
3,702,229	+		Pf6N2E2_3201	0.63	+0.4
3,702,230	-		Pf6N2E2_3201	0.63	+0.4
3,702,230	-		Pf6N2E2_3201	0.63	+0.4
3,702,230	-		Pf6N2E2_3201	0.63	-3.5
3,702,230	-		Pf6N2E2_3201	0.63	-1.6
3,702,352	+		Pf6N2E2_3201	0.85	-0.6
3,702,353	-		Pf6N2E2_3201	0.85	+0.4
3,702,353	-		Pf6N2E2_3201	0.85	+0.4
3,702,437	+				+0.4
3,702,437	+				-0.6
3,702,437	+				-0.6
3,702,437	+				+0.4
3,702,438	-				-0.2
3,702,438	-				-0.9
3,702,438	-				+1.0
3,702,438	-				-0.6
3,702,438	-				+0.4
3,702,438	-				-0.6
3,702,438	-				+0.7
3,702,438	-				+0.4
3,702,438	-				-1.6
3,702,438	-				-0.6
3,702,438	-				+0.4
3,702,442	-				+0.4
3,702,587	+				+0.4
3,702,588	-				+0.4
3,702,668	+		Pf6N2E2_3202	0.10	-0.5
3,702,668	+		Pf6N2E2_3202	0.10	+0.4
3,702,668	+		Pf6N2E2_3202	0.10	+0.4
3,702,668	+		Pf6N2E2_3202	0.10	-1.1
3,702,668	+		Pf6N2E2_3202	0.10	+0.4
3,702,669	-		Pf6N2E2_3202	0.10	-0.6
3,702,669	-		Pf6N2E2_3202	0.10	-0.6
3,702,669	-		Pf6N2E2_3202	0.10	+0.4
3,702,669	-		Pf6N2E2_3202	0.10	+0.4
3,702,679	+		Pf6N2E2_3202	0.12	+0.4
3,702,680	-		Pf6N2E2_3202	0.12	-0.6
3,702,780	+		Pf6N2E2_3202	0.25	+0.4
3,702,780	+		Pf6N2E2_3202	0.25	+0.4
3,702,781	-		Pf6N2E2_3202	0.25	-1.9
3,702,781	-		Pf6N2E2_3202	0.25	+0.4
3,702,781	-		Pf6N2E2_3202	0.25	-0.9
3,702,781	-		Pf6N2E2_3202	0.25	+0.4
3,702,781	-		Pf6N2E2_3202	0.25	+0.8
3,702,783	+		Pf6N2E2_3202	0.25	-0.6
3,702,783	+		Pf6N2E2_3202	0.25	+0.4
3,702,784	-		Pf6N2E2_3202	0.25	+0.4
3,702,784	-		Pf6N2E2_3202	0.25	+0.4
3,702,784	-		Pf6N2E2_3202	0.25	-0.8
3,702,989	-		Pf6N2E2_3202	0.51	-0.2
3,703,027	-		Pf6N2E2_3202	0.56	-1.2
3,703,027	-		Pf6N2E2_3202	0.56	+0.4
3,703,027	-		Pf6N2E2_3202	0.56	+0.4
3,703,324	-				+0.4
3,703,324	-				-0.6
3,703,324	-				-0.6
3,703,324	-				+0.4
3,703,324	-				-0.6
3,703,326	+				+0.4
3,703,326	+				-1.0
3,703,327	-				+0.4
3,703,327	-				+0.4
3,703,327	-				-1.2
3,703,396	-				+0.4
3,703,423	+				+0.4
3,703,424	-				+0.4