Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3171

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,666,029	+		Pf6N2E2_3170	0.52	+0.4
3,666,131	+		Pf6N2E2_3170	0.58	-0.6
3,666,132	-		Pf6N2E2_3170	0.58	-0.8
3,666,132	-		Pf6N2E2_3170	0.58	-0.5
3,666,132	-		Pf6N2E2_3170	0.58	-1.2
3,666,233	+		Pf6N2E2_3170	0.64	-0.6
3,666,233	+		Pf6N2E2_3170	0.64	+0.4
3,666,233	+		Pf6N2E2_3170	0.64	-0.6
3,666,234	-		Pf6N2E2_3170	0.64	-1.2
3,666,234	-		Pf6N2E2_3170	0.64	+0.4
3,666,234	-		Pf6N2E2_3170	0.64	-1.2
3,666,269	+		Pf6N2E2_3170	0.66	+0.4
3,666,269	+		Pf6N2E2_3170	0.66	+0.4
3,666,269	+		Pf6N2E2_3170	0.66	-1.4
3,666,270	-		Pf6N2E2_3170	0.66	-0.6
3,666,270	-		Pf6N2E2_3170	0.66	-0.6
3,666,339	-		Pf6N2E2_3170	0.71	-0.6
3,666,387	+		Pf6N2E2_3170	0.73	-1.0
3,666,387	+		Pf6N2E2_3170	0.73	+0.4
3,666,387	+				+0.4
3,666,387	+		Pf6N2E2_3170	0.73	-0.5
3,666,388	-		Pf6N2E2_3170	0.74	+0.4
3,666,388	-		Pf6N2E2_3170	0.74	-0.4
3,666,388	-		Pf6N2E2_3170	0.74	-0.6
3,666,388	-		Pf6N2E2_3170	0.74	-1.0
3,666,458	+		Pf6N2E2_3170	0.78	+0.4
3,666,459	-		Pf6N2E2_3170	0.78	-1.2
3,666,529	-		Pf6N2E2_3170	0.82	+0.4
3,666,647	+		Pf6N2E2_3170	0.89	-1.6
3,666,647	+		Pf6N2E2_3170	0.89	-1.2
3,666,647	+		Pf6N2E2_3170	0.89	-0.7
3,666,648	-		Pf6N2E2_3170	0.89	-2.9
3,666,648	-		Pf6N2E2_3170	0.89	-0.6
3,666,695	+				+0.4
3,666,835	+				-0.5
3,666,835	+				-0.5
3,666,836	-				-0.6
3,666,836	-				-1.6
3,666,836	-				-0.2
3,666,836	-				+0.4
3,666,836	-				-1.2
3,666,912	+				+0.4
3,666,912	+				-0.6
3,666,912	+				+0.4
3,666,913	-				-0.9
3,667,389	+		Pf6N2E2_3171	0.87	-2.2
3,667,414	+				+0.4
3,667,414	+				-2.6
3,667,431	+				+0.4
3,667,432	-				-0.6
3,667,440	+				+0.4
3,667,559	+				-2.6
3,667,667	+		Pf6N2E2_3172	0.21	-0.1
3,667,667	+		Pf6N2E2_3172	0.21	-0.8
3,667,668	-		Pf6N2E2_3172	0.21	+0.4
3,667,715	+		Pf6N2E2_3172	0.27	-0.6
3,667,716	-		Pf6N2E2_3172	0.27	+0.4
3,667,793	+		Pf6N2E2_3172	0.36	-0.7
3,667,793	+		Pf6N2E2_3172	0.36	+0.4
3,667,793	+		Pf6N2E2_3172	0.36	-2.2
3,667,793	+		Pf6N2E2_3172	0.36	+0.4
3,667,793	+		Pf6N2E2_3172	0.36	+0.4
3,667,794	-		Pf6N2E2_3172	0.36	+0.4
3,667,794	-		Pf6N2E2_3172	0.36	-0.6
3,667,794	-		Pf6N2E2_3172	0.36	-0.0
3,667,794	-		Pf6N2E2_3172	0.36	-1.6
3,667,794	-		Pf6N2E2_3172	0.36	-1.5
3,667,794	-		Pf6N2E2_3172	0.36	+0.4
3,667,795	+		Pf6N2E2_3172	0.37	+0.4
3,667,795	+		Pf6N2E2_3172	0.37	-0.6
3,667,796	-		Pf6N2E2_3172	0.37	-0.6
3,667,796	-		Pf6N2E2_3172	0.37	+0.4
3,667,851	-		Pf6N2E2_3172	0.44	-1.2
3,667,916	+		Pf6N2E2_3172	0.52	-0.6
3,667,917	-		Pf6N2E2_3172	0.52	-0.6
3,667,961	+		Pf6N2E2_3172	0.57	+0.4
3,667,962	-		Pf6N2E2_3172	0.58	-0.6
3,667,962	-		Pf6N2E2_3172	0.58	-1.2
3,667,962	-		Pf6N2E2_3172	0.58	+0.4
3,668,298	+				-0.0
3,668,298	+				-1.6
3,668,299	-				-1.2
3,668,299	-				+0.4
3,668,299	-				-0.6
3,668,383	+				+0.4
3,668,384	-				+1.4
3,668,384	-				+0.4