Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3108

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,596,541	+		Pf6N2E2_3107	0.77	-1.2
3,596,542	-		Pf6N2E2_3107	0.77	-0.6
3,596,610	-		Pf6N2E2_3107	0.81	-0.6
3,596,639	-		Pf6N2E2_3107	0.83	+0.4
3,596,686	-		Pf6N2E2_3107	0.86	+0.4
3,596,722	+		Pf6N2E2_3107	0.88	+0.4
3,596,723	-		Pf6N2E2_3107	0.88	-0.6
3,596,723	-		Pf6N2E2_3107	0.88	+0.4
3,596,723	-		Pf6N2E2_3107	0.88	+0.4
3,596,723	-		Pf6N2E2_3107	0.88	-0.6
3,596,924	+				-2.8
3,596,925	-				+0.4
3,597,047	-				+0.4
3,597,047	-				+0.4
3,597,067	-				-1.9
3,597,092	+				+0.1
3,597,093	-				+0.4
3,597,093	-				+0.4
3,597,113	+				+0.4
3,597,113	+				-0.0
3,597,113	+				+0.4
3,597,113	+				-1.2
3,597,113	+				+0.4
3,597,113	+				+0.4
3,597,114	-				+0.4
3,597,114	-				+0.4
3,597,114	-				+0.4
3,597,114	-				-1.1
3,597,306	+				+0.4
3,597,306	+				-0.6
3,597,370	-				+0.4
3,597,370	-				-1.4
3,597,375	+				+0.4
3,597,376	-				+0.4
3,597,391	+				+0.4
3,597,392	-				-0.3
3,597,392	-				-0.6
3,597,395	+				-0.6
3,597,396	-				-1.2
3,597,396	-				+0.4
3,597,396	-				+0.4
3,597,493	+				+0.4
3,597,493	+				-0.6
3,597,493	+				-0.6
3,597,494	-				+0.4
3,597,494	-				-1.2
3,597,500	-				-0.6
3,597,500	-				+0.4
3,597,614	+		Pf6N2E2_3108	0.33	+0.4
3,597,741	-		Pf6N2E2_3108	0.63	-0.6
3,597,741	-		Pf6N2E2_3108	0.63	-1.4
3,597,741	-		Pf6N2E2_3108	0.63	-0.6
3,597,891	-				+0.4
3,597,911	+				+0.4
3,597,911	+				-1.2
3,597,911	+				-1.2
3,597,911	+				-0.6
3,597,911	+				+0.4
3,597,911	+				-0.9
3,597,912	-				+0.4
3,597,912	-				+0.4
3,597,912	-				+0.4
3,597,912	-				-0.6
3,597,912	-				-1.2
3,597,924	+				-0.6
3,597,925	-				-0.6
3,597,925	-				-0.6
3,597,940	+				-1.2
3,597,940	+				-0.6
3,597,940	+				-0.6
3,597,940	+				+0.4
3,597,940	+				+0.4
3,597,940	+				-1.6
3,597,940	+				-0.6
3,597,940	+				-0.6
3,597,940	+				-1.4
3,597,941	-				-1.0
3,597,941	-				+0.4
3,597,941	-				+0.4
3,597,941	-				+0.4
3,597,941	-				-0.3
3,597,941	-				+0.4
3,597,988	-				-0.8
3,598,046	+		Pf6N2E2_3109	0.13	-0.4
3,598,046	+		Pf6N2E2_3109	0.13	-2.4
3,598,046	+		Pf6N2E2_3109	0.13	-1.2
3,598,047	-		Pf6N2E2_3109	0.13	-0.6
3,598,047	-		Pf6N2E2_3109	0.13	-0.6
3,598,047	-		Pf6N2E2_3109	0.13	+0.4
3,598,047	-		Pf6N2E2_3109	0.13	+0.4
3,598,139	+		Pf6N2E2_3109	0.25	+0.4
3,598,139	+		Pf6N2E2_3109	0.25	-0.4
3,598,139	+		Pf6N2E2_3109	0.25	-1.3
3,598,139	+		Pf6N2E2_3109	0.25	-0.6
3,598,139	+		Pf6N2E2_3109	0.25	-1.2
3,598,139	+		Pf6N2E2_3109	0.25	-0.6
3,598,139	+		Pf6N2E2_3109	0.25	-0.2
3,598,139	+		Pf6N2E2_3109	0.25	-0.6
3,598,139	+		Pf6N2E2_3109	0.25	+0.4
3,598,139	+		Pf6N2E2_3109	0.25	-0.9
3,598,139	+		Pf6N2E2_3109	0.25	-0.3
3,598,139	+		Pf6N2E2_3109	0.25	+0.4
3,598,139	+		Pf6N2E2_3109	0.25	-1.0
3,598,139	+		Pf6N2E2_3109	0.25	-0.6
3,598,140	-		Pf6N2E2_3109	0.25	+0.4
3,598,140	-		Pf6N2E2_3109	0.25	-0.6
3,598,140	-		Pf6N2E2_3109	0.25	-0.6
3,598,140	-		Pf6N2E2_3109	0.25	-1.2
3,598,140	-		Pf6N2E2_3109	0.25	+0.4
3,598,140	-		Pf6N2E2_3109	0.25	+0.4
3,598,140	-		Pf6N2E2_3109	0.25	-0.7
3,598,140	-		Pf6N2E2_3109	0.25	-0.6
3,598,140	-		Pf6N2E2_3109	0.25	-1.2
3,598,141	+		Pf6N2E2_3109	0.25	-0.8
3,598,181	+		Pf6N2E2_3109	0.30	+0.4
3,598,181	+		Pf6N2E2_3109	0.30	+0.4
3,598,181	+		Pf6N2E2_3109	0.30	-0.6
3,598,374	+		Pf6N2E2_3109	0.55	-3.5
3,598,374	+		Pf6N2E2_3109	0.55	-1.8
3,598,375	-		Pf6N2E2_3109	0.55	-0.1
3,598,375	-		Pf6N2E2_3109	0.55	+0.1
3,598,375	-		Pf6N2E2_3109	0.55	-0.7
3,598,375	-		Pf6N2E2_3109	0.55	-0.6
3,598,377	+		Pf6N2E2_3109	0.55	+0.4
3,598,377	+		Pf6N2E2_3109	0.55	-1.6
3,598,378	-		Pf6N2E2_3109	0.55	+0.4
3,598,378	-		Pf6N2E2_3109	0.55	+0.4
3,598,378	-		Pf6N2E2_3109	0.55	-1.2
3,598,378	-		Pf6N2E2_3109	0.55	+0.4
3,598,378	-		Pf6N2E2_3109	0.55	+0.4
3,598,511	+		Pf6N2E2_3109	0.72	+0.4
3,598,511	+		Pf6N2E2_3109	0.72	-0.6
3,598,553	-		Pf6N2E2_3109	0.77	+0.4
3,598,553	-		Pf6N2E2_3109	0.77	+0.4
3,598,605	-		Pf6N2E2_3109	0.84	-0.1