Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3100

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,585,662	+				-1.0
3,585,662	+				-0.6
3,585,662	+				+0.4
3,585,662	+				+0.4
3,585,662	+				-1.2
3,585,662	+				+0.4
3,585,663	-				+0.4
3,585,663	-				-1.0
3,585,727	+				+0.8
3,585,727	+				+0.4
3,585,727	+				-0.6
3,585,727	+				-0.6
3,585,727	+				-0.6
3,585,727	+				-1.6
3,585,727	+				-1.0
3,585,727	+				-0.6
3,585,727	+				+0.4
3,585,727	+				-0.6
3,585,728	-				+0.4
3,585,728	-				-0.9
3,585,728	-				+2.0
3,585,728	-				-0.2
3,585,728	-				-0.6
3,585,728	-				+0.9
3,585,729	+				+0.4
3,585,729	+				+0.4
3,585,729	+				-0.6
3,585,730	-				-0.9
3,585,730	-				-0.5
3,585,730	-				+0.4
3,585,731	+				-0.6
3,585,731	+				-0.6
3,585,731	+				+0.4
3,585,731	+				-0.8
3,585,731	+				-0.6
3,585,731	+				+0.4
3,585,731	+				+0.4
3,585,731	+				-0.0
3,585,731	+				-0.1
3,585,731	+				-0.2
3,585,731	+				-0.6
3,585,731	+				+0.4
3,585,731	+				+0.4
3,585,731	+				-0.3
3,585,731	+				-1.2
3,585,731	+				+0.4
3,585,732	-				-0.2
3,585,732	-				-0.6
3,585,732	-				-0.6
3,585,732	-				-1.0
3,585,732	-				+0.4
3,585,732	-				+0.4
3,585,732	-				+0.4
3,585,835	+		Pf6N2E2_3099	0.17	-4.8
3,585,835	+		Pf6N2E2_3099	0.17	-0.6
3,585,835	+		Pf6N2E2_3099	0.17	+0.4
3,585,835	+		Pf6N2E2_3099	0.17	-1.2
3,585,835	+		Pf6N2E2_3099	0.17	+0.4
3,585,836	-		Pf6N2E2_3099	0.17	-0.6
3,585,836	-		Pf6N2E2_3099	0.17	+0.4
3,585,836	-		Pf6N2E2_3099	0.17	+0.4
3,585,836	-		Pf6N2E2_3099	0.17	-0.7
3,585,836	-		Pf6N2E2_3099	0.17	+0.4
3,585,836	-		Pf6N2E2_3099	0.17	-2.8
3,585,836	-		Pf6N2E2_3099	0.17	-0.6
3,585,837	+		Pf6N2E2_3099	0.17	+0.4
3,585,837	+		Pf6N2E2_3099	0.17	-0.6
3,585,837	+		Pf6N2E2_3099	0.17	-1.2
3,585,837	+		Pf6N2E2_3099	0.17	-0.6
3,585,837	+		Pf6N2E2_3099	0.17	-1.2
3,585,838	-		Pf6N2E2_3099	0.17	+0.4
3,585,838	-		Pf6N2E2_3099	0.17	-1.2
3,585,838	-		Pf6N2E2_3099	0.17	+0.4
3,585,838	-		Pf6N2E2_3099	0.17	+0.4
3,585,838	-		Pf6N2E2_3099	0.17	+0.4
3,586,057	+		Pf6N2E2_3099	0.42	+0.4
3,586,057	+		Pf6N2E2_3099	0.42	+0.4
3,586,057	+		Pf6N2E2_3099	0.42	-1.6
3,586,057	+		Pf6N2E2_3099	0.42	+0.4
3,586,217	+		Pf6N2E2_3099	0.61	-1.2
3,586,217	+		Pf6N2E2_3099	0.61	+0.4
3,586,407	+		Pf6N2E2_3099	0.83	+1.4
3,586,408	-		Pf6N2E2_3099	0.83	-0.8
3,586,408	-		Pf6N2E2_3099	0.83	-0.9
3,586,408	-		Pf6N2E2_3099	0.83	+0.4
3,586,418	-		Pf6N2E2_3099	0.84	-0.6
3,586,418	-		Pf6N2E2_3099	0.84	+0.4
3,586,439	+		Pf6N2E2_3099	0.87	+0.4
3,586,439	+		Pf6N2E2_3099	0.87	-1.6
3,586,440	-		Pf6N2E2_3099	0.87	-1.2
3,586,440	-		Pf6N2E2_3099	0.87	+0.4
3,586,449	+		Pf6N2E2_3099	0.88	+0.4
3,586,450	-		Pf6N2E2_3099	0.88	+1.4
3,586,495	-				+0.4
3,586,536	+				-1.3
3,586,537	-				+0.4
3,586,537	-				+0.4
3,586,539	+				+0.4
3,586,540	-				+0.4
3,586,560	-				+0.4
3,586,560	-				-0.6
3,586,616	+		Pf6N2E2_3100	0.21	-0.6
3,586,662	-		Pf6N2E2_3100	0.35	-1.6
3,586,662	-		Pf6N2E2_3100	0.35	-2.0
3,586,770	+		Pf6N2E2_3100	0.70	-1.3
3,586,771	-		Pf6N2E2_3100	0.70	-0.6
3,586,771	-		Pf6N2E2_3100	0.70	+0.4
3,586,855	+				-1.4
3,586,857	+				-1.5
3,586,857	+				+0.4
3,586,857	+				+0.4
3,586,858	-				-0.8
3,586,863	+				-1.5
3,586,863	+				-2.4
3,586,932	+				-0.6
3,586,932	+				+0.4
3,586,932	+				-0.6
3,586,932	+				-0.6
3,586,932	+				+0.4
3,586,933	-				+0.4
3,586,936	+				+0.4
3,586,936	+				-0.6
3,586,936	+				-0.6
3,586,936	+				-0.6
3,586,936	+				-2.8
3,586,936	+				-0.6
3,586,936	+				-6.7
3,586,936	+				+0.4
3,586,945	+				+0.4
3,586,945	+				-0.6
3,586,945	+				-0.6
3,586,946	-				+0.6
3,586,946	-				-0.6
3,586,962	-				+0.4
3,587,095	+				-0.6
3,587,127	+				+0.4
3,587,127	+				+0.4
3,587,127	+				+0.4
3,587,127	+				-0.6
3,587,127	+				-0.6
3,587,128	-				-2.2
3,587,128	-				+0.4
3,587,128	-				+0.4
3,587,178	-				-0.6
3,587,211	-				+0.4