Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2933

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,423,639	+				-0.6
3,423,672	+				-0.6
3,423,673	-				-1.2
3,423,673	-				+0.4
3,423,673	-				-0.8
3,424,047	+		Pf6N2E2_2932	0.56	+0.4
3,424,048	-		Pf6N2E2_2932	0.56	-0.9
3,424,048	-		Pf6N2E2_2932	0.56	-1.2
3,424,176	+		Pf6N2E2_2932	0.78	-1.2
3,424,176	+		Pf6N2E2_2932	0.78	-0.0
3,424,177	-		Pf6N2E2_2932	0.78	-0.6
3,424,199	+		Pf6N2E2_2932	0.81	+0.4
3,424,199	+		Pf6N2E2_2932	0.81	-0.6
3,424,199	+		Pf6N2E2_2932	0.81	-0.6
3,424,199	+		Pf6N2E2_2932	0.81	-2.0
3,424,199	+		Pf6N2E2_2932	0.81	-0.5
3,424,199	+		Pf6N2E2_2932	0.81	-1.0
3,424,200	-		Pf6N2E2_2932	0.82	-1.2
3,424,200	-		Pf6N2E2_2932	0.82	-0.6
3,424,200	-		Pf6N2E2_2932	0.82	-0.6
3,424,200	-		Pf6N2E2_2932	0.82	-1.9
3,424,200	-		Pf6N2E2_2932	0.82	+0.4
3,424,200	-		Pf6N2E2_2932	0.82	+0.4
3,424,200	-		Pf6N2E2_2932	0.82	+0.4
3,424,200	-		Pf6N2E2_2932	0.82	-1.2
3,424,200	-		Pf6N2E2_2932	0.82	+0.4
3,424,200	-		Pf6N2E2_2932	0.82	-1.1
3,424,200	-		Pf6N2E2_2932	0.82	-0.6
3,424,208	+		Pf6N2E2_2932	0.83	-0.6
3,424,208	+		Pf6N2E2_2932	0.83	+0.4
3,424,209	-		Pf6N2E2_2932	0.83	-1.2
3,424,209	-		Pf6N2E2_2932	0.83	-0.6
3,424,209	-		Pf6N2E2_2932	0.83	-0.7
3,424,209	-		Pf6N2E2_2932	0.83	-0.6
3,424,295	+				+0.4
3,424,296	-				+0.4
3,424,296	-				+0.4
3,424,406	-		Pf6N2E2_2933	0.19	-0.6
3,424,406	-		Pf6N2E2_2933	0.19	-1.2
3,424,472	+		Pf6N2E2_2933	0.39	-0.6
3,424,472	+		Pf6N2E2_2933	0.39	+0.4
3,424,638	+		Pf6N2E2_2933	0.90	-1.8
3,424,710	+				+0.4
3,424,721	+				-0.6
3,424,743	+				-1.2
3,424,744	-				-0.6
3,424,788	+				+0.4
3,424,788	+				-0.6
3,424,834	+				+0.4
3,424,834	+				-1.0
3,424,834	+				+0.4
3,424,835	-				-0.6
3,424,835	-				-0.7
3,424,835	-				-0.9
3,424,839	+				-0.6
3,424,839	+				+1.4
3,424,839	+				+0.4
3,424,839	+				+0.4
3,424,839	+				-0.9
3,424,839	+				+0.4
3,424,839	+				-2.8
3,424,840	-				+0.4
3,424,840	-				+0.2
3,425,060	+		Pf6N2E2_2934	0.26	+0.4
3,425,060	+		Pf6N2E2_2934	0.26	+0.4
3,425,211	-		Pf6N2E2_2934	0.48	-1.6
3,425,364	-		Pf6N2E2_2934	0.71	+0.4
3,425,364	-		Pf6N2E2_2934	0.71	+0.4
3,425,583	+				-0.5
3,425,584	-				-0.6
3,425,584	-				+0.4
3,425,599	+				-0.6
3,425,600	-				+0.4
3,425,600	-				+0.4
3,425,622	+				-1.6
3,425,623	-				-0.4
3,425,624	+				+0.4
3,425,624	+				-1.0
3,425,624	+				+0.4
3,425,624	+				+0.4