Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2850

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,339,969	+		Pf6N2E2_2849	0.11	+0.4
3,339,969	+		Pf6N2E2_2849	0.11	+0.4
3,339,970	-		Pf6N2E2_2849	0.11	-0.6
3,340,155	+		Pf6N2E2_2849	0.32	+0.4
3,340,202	-		Pf6N2E2_2849	0.37	-0.6
3,340,620	-		Pf6N2E2_2849	0.83	+0.4
3,340,865	+				-0.6
3,340,865	+				-1.2
3,340,865	+				-1.6
3,340,865	+				+0.4
3,340,865	+				-0.2
3,340,866	-				+0.4
3,340,866	-				-0.9
3,340,866	-				-0.7
3,340,866	-				-0.6
3,340,878	+				-0.6
3,340,878	+				+0.4
3,340,878	+				+0.4
3,340,878	+				-0.6
3,340,879	-				+0.4
3,340,880	+				+0.9
3,340,880	+				+1.4
3,340,880	+				+0.4
3,340,880	+				+0.4
3,340,880	+				+0.4
3,340,880	+				+0.4
3,340,880	+				-1.2
3,340,880	+				+0.4
3,340,880	+				+1.4
3,340,880	+				-0.6
3,340,881	-				+0.4
3,340,881	-				-0.6
3,340,881	-				-0.7
3,340,881	-				-0.6
3,340,881	-				+0.4
3,341,113	-		Pf6N2E2_2850	0.39	+0.4
3,341,180	-		Pf6N2E2_2850	0.51	-1.2
3,341,180	-		Pf6N2E2_2850	0.51	-1.6
3,341,301	+		Pf6N2E2_2850	0.71	-0.9
3,341,301	+		Pf6N2E2_2850	0.71	-1.2
3,341,302	-		Pf6N2E2_2850	0.72	-1.6
3,341,302	-		Pf6N2E2_2850	0.72	+0.4
3,341,302	-		Pf6N2E2_2850	0.72	-1.5
3,341,436	-				-0.6
3,341,470	+				+0.1
3,341,494	+				-1.2
3,341,494	+				+0.4
3,341,518	+				-0.6
3,341,537	+				-0.5
3,341,538	-				-0.6
3,341,631	+				-1.6
3,342,315	+				+0.4
3,342,316	-				+0.4
3,342,316	-				-0.6
3,342,417	+				-0.6
3,342,418	-				-0.6