Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2708

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,199,975	-		Pf6N2E2_2706	0.80	-2.5
3,200,483	-		Pf6N2E2_2707	0.47	-1.7
3,200,483	-		Pf6N2E2_2707	0.47	-0.7
3,200,576	-		Pf6N2E2_2707	0.60	-2.4
3,200,690	-		Pf6N2E2_2707	0.77	-0.7
3,200,690	-		Pf6N2E2_2707	0.77	-0.7
3,200,709	-		Pf6N2E2_2707	0.80	-1.7
3,200,710	+		Pf6N2E2_2707	0.80	-0.7
3,200,954	-		Pf6N2E2_2708	0.13	-0.7
3,200,954	-		Pf6N2E2_2708	0.13	-0.7
3,200,954	-		Pf6N2E2_2708	0.13	-0.7
3,201,090	+		Pf6N2E2_2708	0.31	-1.7
3,201,091	-		Pf6N2E2_2708	0.31	-0.7
3,201,204	+		Pf6N2E2_2708	0.46	+0.3
3,201,265	-		Pf6N2E2_2708	0.54	+0.3
3,201,265	-		Pf6N2E2_2708	0.54	+0.3
3,201,265	-		Pf6N2E2_2708	0.54	-1.2
3,201,265	-		Pf6N2E2_2708	0.54	-0.7
3,201,265	-		Pf6N2E2_2708	0.54	-0.7
3,201,288	+		Pf6N2E2_2708	0.57	-0.7
3,201,626	-				+0.3
3,201,626	-				-0.7
3,201,626	-				+0.3
3,201,626	-				+0.3
3,201,643	-				+0.3
3,201,643	-				-0.3
3,201,676	+				+0.3
3,201,676	+				+0.3
3,201,743	-				+0.3
3,201,743	-				-2.5
3,201,847	+		Pf6N2E2_2709	0.13	+0.2
3,201,882	-		Pf6N2E2_2709	0.16	+0.3
3,201,971	+		Pf6N2E2_2709	0.23	+0.3
3,201,993	-		Pf6N2E2_2709	0.25	-0.7
3,201,994	+		Pf6N2E2_2709	0.25	-0.7
3,201,994	+		Pf6N2E2_2709	0.25	+0.3
3,201,995	-		Pf6N2E2_2709	0.25	-1.8
3,201,995	-		Pf6N2E2_2709	0.25	-1.2
3,201,995	-		Pf6N2E2_2709	0.25	+0.3
3,201,995	-		Pf6N2E2_2709	0.25	-0.2
3,201,995	-		Pf6N2E2_2709	0.25	-1.2
3,201,995	-		Pf6N2E2_2709	0.25	-0.7
3,201,995	-		Pf6N2E2_2709	0.25	+0.3
3,201,995	-		Pf6N2E2_2709	0.25	-0.7
3,202,069	+		Pf6N2E2_2709	0.31	-0.7
3,202,069	+		Pf6N2E2_2709	0.31	+1.3
3,202,069	+		Pf6N2E2_2709	0.31	+0.3
3,202,070	-		Pf6N2E2_2709	0.31	-0.4
3,202,070	-		Pf6N2E2_2709	0.31	-0.7
3,202,084	+		Pf6N2E2_2709	0.32	-0.7
3,202,084	+		Pf6N2E2_2709	0.32	+0.3
3,202,084	+		Pf6N2E2_2709	0.32	+0.3
3,202,084	+		Pf6N2E2_2709	0.32	+0.3
3,202,085	-		Pf6N2E2_2709	0.32	-1.2
3,202,085	-		Pf6N2E2_2709	0.32	-1.2
3,202,085	-		Pf6N2E2_2709	0.32	+0.3
3,202,085	-		Pf6N2E2_2709	0.32	+0.3
3,202,093	+		Pf6N2E2_2709	0.32	-2.0
3,202,093	+		Pf6N2E2_2709	0.32	+0.3
3,202,093	+		Pf6N2E2_2709	0.32	+0.3
3,202,094	-		Pf6N2E2_2709	0.33	-1.2
3,202,094	-		Pf6N2E2_2709	0.33	+0.3
3,202,094	-		Pf6N2E2_2709	0.33	+0.3
3,202,121	-		Pf6N2E2_2709	0.35	+0.3
3,202,137	+		Pf6N2E2_2709	0.36	-0.7
3,202,137	+		Pf6N2E2_2709	0.36	+0.3
3,202,137	+		Pf6N2E2_2709	0.36	+0.3
3,202,137	+		Pf6N2E2_2709	0.36	-0.7
3,202,137	+		Pf6N2E2_2709	0.36	-2.2
3,202,137	+		Pf6N2E2_2709	0.36	-1.7
3,202,137	+		Pf6N2E2_2709	0.36	+0.3
3,202,137	+		Pf6N2E2_2709	0.36	+0.3
3,202,137	+		Pf6N2E2_2709	0.36	-0.7
3,202,137	+		Pf6N2E2_2709	0.36	+0.3
3,202,138	-		Pf6N2E2_2709	0.36	+0.3
3,202,138	-		Pf6N2E2_2709	0.36	-0.7
3,202,138	-		Pf6N2E2_2709	0.36	+0.3
3,202,138	-		Pf6N2E2_2709	0.36	-0.7
3,202,138	-		Pf6N2E2_2709	0.36	+0.3
3,202,138	-		Pf6N2E2_2709	0.36	-0.7
3,202,138	-		Pf6N2E2_2709	0.36	+0.3
3,202,138	-		Pf6N2E2_2709	0.36	+0.9
3,202,138	-		Pf6N2E2_2709	0.36	-0.7
3,202,138	-		Pf6N2E2_2709	0.36	+0.3
3,202,192	+		Pf6N2E2_2709	0.40	-0.4
3,202,192	+		Pf6N2E2_2709	0.40	+0.3
3,202,193	-		Pf6N2E2_2709	0.40	+0.3
3,202,193	-		Pf6N2E2_2709	0.40	+0.3
3,202,193	-		Pf6N2E2_2709	0.40	-0.9
3,202,193	-		Pf6N2E2_2709	0.40	-0.4
3,202,270	+		Pf6N2E2_2709	0.46	+0.3
3,202,270	+		Pf6N2E2_2709	0.46	-0.6
3,202,317	-		Pf6N2E2_2709	0.50	-0.4
3,202,318	+		Pf6N2E2_2709	0.50	-1.7
3,202,319	-		Pf6N2E2_2709	0.50	+0.3
3,202,319	-		Pf6N2E2_2709	0.50	-1.2
3,202,319	-		Pf6N2E2_2709	0.50	+0.3
3,202,319	-		Pf6N2E2_2709	0.50	-0.5
3,202,439	-		Pf6N2E2_2709	0.59	-0.7
3,202,439	-		Pf6N2E2_2709	0.59	-0.7
3,202,439	-		Pf6N2E2_2709	0.59	-0.7
3,202,606	+		Pf6N2E2_2709	0.72	+0.3
3,202,606	+		Pf6N2E2_2709	0.72	-1.2
3,202,606	+		Pf6N2E2_2709	0.72	+0.3
3,202,606	+		Pf6N2E2_2709	0.72	+0.3
3,202,606	+		Pf6N2E2_2709	0.72	-0.7
3,202,607	-		Pf6N2E2_2709	0.72	-0.7
3,202,607	-		Pf6N2E2_2709	0.72	-0.8