Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2656

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,127,817	-				+0.3
3,127,817	-				-1.2
3,127,817	-				-0.9
3,127,817	-				+0.3
3,128,051	-		Pf6N2E2_2655	0.22	+0.3
3,128,051	-		Pf6N2E2_2655	0.22	+0.3
3,128,051	-		Pf6N2E2_2655	0.22	+0.3
3,128,164	+		Pf6N2E2_2655	0.34	+0.3
3,128,165	-		Pf6N2E2_2655	0.34	+0.3
3,128,545	+		Pf6N2E2_2655	0.74	-1.2
3,128,545	+		Pf6N2E2_2655	0.74	-0.9
3,128,546	-		Pf6N2E2_2655	0.74	-1.2
3,128,546	-		Pf6N2E2_2655	0.74	-1.3
3,128,687	+		Pf6N2E2_2655	0.89	-0.7
3,128,688	-		Pf6N2E2_2655	0.89	-0.5
3,128,688	-		Pf6N2E2_2655	0.89	-0.7
3,128,750	-				-0.2
3,128,875	+		Pf6N2E2_2656	0.18	-0.7
3,128,875	+		Pf6N2E2_2656	0.18	-1.7
3,128,875	+		Pf6N2E2_2656	0.18	-0.7
3,128,951	-		Pf6N2E2_2656	0.37	+0.3
3,128,951	-		Pf6N2E2_2656	0.37	-1.7
3,129,149	+		Pf6N2E2_2656	0.86	+0.3
3,129,150	-		Pf6N2E2_2656	0.86	-0.7
3,129,205	+				+0.3
3,129,243	+				+0.3
3,129,243	+				-0.7
3,129,265	+				+0.3
3,129,265	+				+0.3
3,129,265	+				+0.3
3,129,265	+				+0.1
3,129,265	+				+0.3
3,129,266	-				+0.3
3,129,266	-				+0.3
3,129,266	-				+0.3
3,129,266	-				+0.3
3,129,266	-				-1.2
3,129,266	-				+1.3
3,129,266	-				+0.3
3,129,272	-				-1.0
3,129,383	-				+1.3
3,129,749	+		Pf6N2E2_2657	0.32	+0.3
3,129,750	-		Pf6N2E2_2657	0.32	+0.3
3,129,750	-		Pf6N2E2_2657	0.32	+0.3
3,129,750	-		Pf6N2E2_2657	0.32	+0.3
3,129,789	+		Pf6N2E2_2657	0.35	-0.2
3,129,972	-		Pf6N2E2_2657	0.47	+0.3
3,129,972	-		Pf6N2E2_2657	0.47	+0.3
3,130,097	+		Pf6N2E2_2657	0.55	+0.3
3,130,097	+		Pf6N2E2_2657	0.55	-0.7
3,130,115	+		Pf6N2E2_2657	0.57	+0.3
3,130,115	+		Pf6N2E2_2657	0.57	+0.8
3,130,115	+		Pf6N2E2_2657	0.57	+0.3
3,130,115	+		Pf6N2E2_2657	0.57	-1.2
3,130,116	-		Pf6N2E2_2657	0.57	+0.3